Plectropomus leopardus (leopard coralgrouper): 121961181
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Entry
121961181 CDS
T07454
Symbol
trim24
Name
(RefSeq) transcription intermediary factor 1-alpha isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
plep01001
]
121961181 (trim24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plep04121
]
121961181 (trim24)
Enzymes [BR:
plep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121961181 (trim24)
Protein kinases [BR:
plep01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
121961181 (trim24)
Ubiquitin system [BR:
plep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121961181 (trim24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-RING_5
zf-C3HC4_2
PHD-1st_NSD
zf-C3HC4
zf-RING_2
PML_CC
DUF5054
DUF1351
FemAB_like
ParB
CdaS_N
DUF7615
DUF7217
Motif
Other DBs
NCBI-GeneID:
121961181
NCBI-ProteinID:
XP_042366993
LinkDB
All DBs
Position
22:16545622..16562139
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AA seq
1076 aa
AA seq
DB search
MDESAENVDNDDIVIIVENEAESLPAEEERVKQQGTFGLMDTCPICKLSFHNREPKLLPC
LHSFCKRCLPAPFRSADPRRDSQGQVENNKSLGAIRCPVCRQECWEMDMLDNFFVKDSAE
VPSSTVEKTSQVCMSCDDNTEATGYCVECVEFLCVTCIEAHQRVKFTRDHTIRQKEEMSP
EALGISTQKPVFCDIHKQEPLKLFCETCDRLTCRDCQLLKHKDHNYQFLEDAYRNHRQYL
ENMTQQLQEKRKAIEEVSGCISTGLQQVEENRKAVTNEIKKSICNLIMEINRKGKILVNQ
LEALTKDHELGLKKQQEDVNSLSRHLDHVISFTKWATASHSGTALLYCKRLILFQIHYLM
RASCNPSIVPQSSVRFQCRSGFWATNVDLGSLVVERGPGRQPITNHQAGPRAEAPSGALS
ASAQQRQSTLAQLQMQTSVIPLSKVDKLSQQPHRQPPPNHWSWYQNVRLPGPPGPPPPPR
PIHGGSSPSQGPPSMGQPGRRYGSSHSNPRSPTSSMLHNTAFPPAQSLRELIQTSNFPPK
PMDLLQGTSRYPQPLSAGAAAQTSLHQRGLTESSYLKRSEAGASVPSITISIPKPTFAPS
LASATTDKTSTVNHIAVQARQNSPMAKPSSSDRSTGTASWRQNSEPPSAPSAKRRRRSSP
GPVIVIKDEPEDEDEVRFVQSSLPDSSTGAHSKPRQQQKVSVPVPVPGPESGKEQCPQPA
AQPESEKRAEPEEDPNEDWCAVCQNGGELLCCDKCPKVFHLACHIPALNESPSGEWFCSL
CRDLASPEMEYDCDSKDGPVSEGCPPVERRKCERLLLRLFCNDFSTDFQQPATPSETRKY
KELIKTPMDLSIVKKKLESKSKEGEYYSSPEEFVADIRLIFSNCSKYYKATSEVGSAGLY
LEDYFEEQLKLVYPNRVFPGGREEQMIPPLEDEIDEEEEIMEEGMAPIEDDKPQSPAGEG
IPPVEEDLPPLEEATASEEERKSEMKAIDASENGTDEKVAATEENVPPAEEAKQGEEASV
KEAESSPAAGSKTREEVAPSSPKEESLKLPTDSTVDPPEAQEKGSAPADTAKEKEG
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaagtgccgaaaatgttgacaatgacgacattgtcattatcgtggaaaacgag
gcagaaagtttgccagccgaggaagagagggtgaaacagcaaggcaccttcgggctcatg
gacacttgtccaatctgcaagttgagcttccacaacagagagcccaaacttctcccgtgt
ctccactctttctgcaagaggtgtcttcctgcccccttcaggagtgccgacccgaggcgt
gactcgcaaggtcaagtcgaaaacaacaaatcattgggtgctatccggtgtccggtatgc
agacaggaatgctgggagatggacatgttggataatttctttgtcaaggactcggcagag
gtgccgagcagcaccgtggagaaaaccagccaggtgtgtatgagctgcgatgacaacaca
gaggcaacaggttactgcgtggagtgtgtggagtttctgtgtgtgacgtgcattgaggcg
caccaacgggtcaagttcaccagggatcacaccatacgccagaaagaggagatgtctcca
gaagcactcggtatctccacacagaagcccgtgttttgtgacattcacaagcaagagccg
ctgaagctgttttgtgagacgtgtgacagactcacctgtcgggactgtcagctgcttaag
cacaaggatcacaattaccagtttttggaggatgcgtacaggaaccacaggcagtatctg
gagaacatgacacagcagttgcaagagaaaagaaaggcgatcgaggaagtgtctggctgt
atcagcactggactccaacaagttgaggaaaaccggaaggccgtaacaaatgaaataaag
aagtctatctgcaacttgattatggagatcaacaggaagggaaagattttggtcaaccag
ctcgaggctctgactaaagaccacgagctgggtttaaaaaagcagcaagaggacgtcaac
tctctgagcaggcaccttgaccacgtcatcagctttaccaaatgggccacagcgagccac
agtggaacggctctgttatactgcaagagactgatccttttccagatccattacctgatg
agagcaagctgtaatccctccatcgtccctcagagttctgttcgctttcagtgtcgctct
ggtttctgggccacaaatgtcgaccttggttctctggttgttgaaaggggcccgggaagg
cagcctatcaccaaccaccaggcaggtcccagagcggaggcccccagtggagcgctctcg
gcctcagctcagcagcggcagagcacgctggctcagctccagatgcagacatctgttatt
cctctgtccaaggtggacaagctctcccaacagccccacaggcagcccccgcctaaccac
tggtcctggtaccaaaatgtcaggctcccgggaccccccggccccccccccccccccaga
cccatccacggagggtcctccccctcccaaggcccccccagcatgggacagccgggacgc
agatacggaagctcccactccaaccccagaagcccgacatcatccatgcttcacaacaca
gcattcccacctgctcagtctctgagagaactgatccaaacctccaacttccctcctaaa
cccatggatttgttgcagggtacgtcacgttacccacagcctctgtctgccggagctgct
gcacagacgtcacttcatcagcggggcctgacggagtcctcttacctgaagaggagtgag
gctggtgcgtctgtcccctccatcaccatctctattcccaaacccacctttgctccaagt
ctagcctcagcaactacagacaaaacaagcacagttaatcacatagcagttcaagcaagg
cagaactcaccgatggccaaaccatcttcttcagacagaagcacagggacggcttcctgg
aggcaaaattctgagcctccatccgccccctcagctaagaggcgaagacggtcgtccccg
gggcccgtcatcgtcatcaaggacgaaccagaggatgaggacgaagttcgatttgtgcag
tccagcctgccggacagcagcaccggggctcactcgaagcctcggcagcagcaaaaggtg
tctgttccagtccccgtccctggaccagagtctgggaaagagcagtgtccgcagcccgca
gcacagccagagtctgagaagagagcggagccagaggaggatccaaatgaggactggtgc
gccgtctgtcagaacggaggggagctgctctgctgcgacaagtgtcccaaagtttttcat
ctggcctgccacattcctgctctcaatgagtcccctagtggggagtggttctgttcgctc
tgccgagacctggcgtcccctgagatggagtacgactgtgacagcaaggatggtcccgtc
tctgaaggatgtccacctgttgaaagaaggaagtgtgagaggctgctccttcgtctcttc
tgcaatgacttcagtactgactttcagcagcctgctactccatcagagacaagaaagtac
aaagagctgatcaagaccccgatggatttgtcaatagtcaagaagaagctggagtcaaag
tcgaaggagggtgaatattatagcagtccggaggagtttgttgcagacatccggctcata
ttctccaactgttcgaagtactacaaggcgacctcagaggtgggtagtgcaggcttgtac
ttggaggactactttgaggaacagttgaaactagtctacccaaatagggtcttccccgga
gggagggaagaacagatgatccctcctttggaggacgagatcgatgaggaggaagagatt
atggaggaaggcatggctcccatcgaagacgataaaccgcaaagtcctgcaggagaagga
atcccccctgtggaggaggacttgcctcctctggaagaagcgacagcctcagaggaggaa
agaaagtcagagatgaaggcgatcgatgcgagtgaaaatgggacagatgaaaaggtagca
gctacagaggaaaacgtgcctcctgcagaggaggcaaagcagggtgaggaggcctctgtg
aaggaggcagagagctctccagctgctggtagcaaaacaagagaagaagtagctcccagc
tccccaaaagaggagagccttaagctccctacagactcgactgtggatccgcctgaagcc
caggaaaaaggctcggctcctgcagacacagccaaagagaaagagggatag
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