Plectropomus leopardus (leopard coralgrouper): 121961211
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Entry
121961211 CDS
T07454
Symbol
apex1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease isoform X1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121961211 (apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plep03400
]
121961211 (apex1)
Enzymes [BR:
plep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
121961211 (apex1)
DNA repair and recombination proteins [BR:
plep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
121961211 (apex1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
121961211
NCBI-ProteinID:
XP_042367048
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All DBs
Position
22:complement(19747687..19763482)
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AA seq
310 aa
AA seq
DB search
MKRGKNAEDAAADGENDSGAASAKKTKKAKEPEAPVLYDDPPDKMTSKDGREANMKITSW
NVDGLRAWVKKKGLDWVREEAPDILCLQETKCAEKSLPADITSMPEYPHKYWAGSDDKEG
YSGVAMLCKTEPLKVTYGIGKEEHDKEGRVITAEFPNFYLVTTYVPNAGRGLVRLDYRKT
WDVDFRAYLSELDMQKPLVLCGDLNVAHQEIDLKNPKGNKKNAGFTPDEREGFSQLLGSG
FTDSFRELYPEQTNAYTFWTYMMNARAKNVGWRLDYFLLSSSLVPGLCDSKIRNKALGSD
HCPITLLLAV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaggaaagaatgcagaggatgcggctgcagacggggagaatgactccggcgct
gcttctgcaaagaaaacaaagaaggccaaggagccagaggctccagtactgtacgatgat
cctcctgacaaaatgaccagcaaagatggacgggaggccaacatgaagatcacttcctgg
aacgtcgacggtctgagggcctgggtgaaaaagaagggtttggattgggtgcgtgaggaa
gctccagatattttgtgcctgcaggagaccaagtgtgcagaaaaatctctccctgcagac
attacctcaatgccggagtatcctcacaaatactgggccgggtcagatgataaggagggt
tacagtggtgtggccatgctctgtaagactgaaccgctcaaggtcacctatggcattggt
aaagaagagcatgacaaggagggccgagtcatcactgcagagttccccaacttctatctg
gtgaccacctatgtgccaaatgccggaagaggccttgtgcgcctagattaccgcaaaacc
tgggacgtggacttccgggcatacctcagcgagctggacatgcagaagcccctggtgctg
tgtggcgacctcaatgttgcacaccaggagatagacctgaaaaaccccaaagggaacaag
aaaaacgcaggcttcaccccggatgagcgcgagggcttcagccagctgctgggatccggt
ttcaccgacagcttccgcgagctgtaccccgagcagaccaatgcctacaccttctggacc
tacatgatgaacgcccgcgcaaagaatgtgggctggaggctcgattactttttgctgtcg
tccagtctggtgccaggcctgtgcgacagcaagattcgcaacaaggccttgggaagcgac
cactgccccatcacgctgctcttagctgtgtag
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