Plectropomus leopardus (leopard coralgrouper): 121961896
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Entry
121961896 CDS
T07454
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 1-like
KO
K13095
splicing factor 1
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121961896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plep03041
]
121961896
Spliceosome [BR:
plep03041
]
Complex A
Other components
Complex A specific factors
121961896
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
121961896
NCBI-ProteinID:
XP_042367924
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All DBs
Position
23:complement(2447310..2461074)
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AA seq
679 aa
AA seq
DB search
MATGANATPLGKLHPSIGAKRGFDAGPGAGNGLMPTPGPPASFPSLQGFQPPMPSASFPQ
PHQFSPGPSFATQAPQQAAAGGGLAKTDFGQKKSRKKSRWSSETPDQKTVIPGMPTVIPP
GLTRDQERAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTR
KKIEEERHSLITEMVGLNPDFKPPADYKPPATRVNDKVMIPQDEYPEINFVGLLIGPRGN
TLKNIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQI
RNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQNSEPRSITNTTLCTKC
GGAGHISSDCKYTSSFAAHRATGGEPPQSAQDKARMDKEYLSLMAELGEAPVPASGGGHN
NSPAGAPRATGPNSTQPPPQTRPPWMSSAPAENRSFHGMHGGPGGHGGPHSFPPPMPNMG
GPPMPPHPNGPPPPWMQPPPPPMGQGPGPHGHPMGLLPPPMGMMPPPPPPPSNQPPPPPS
GPLPPWQQQAPPPPPTSSMATSTPLPWQQNTTTTSSPGTGTLPPWQQPQQPAASGAQPPP
PWGTPSMVPPPPGVQPPLPPGAPPPPPPPPPGSTGMMYXPPPPPPPMDPSNFVTMMGMGV
PGMPPFGMPPAPPPPPPQN
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggccacgggcgcaaacgcaactcctttagggaagttgcacccaagtattggcgctaaa
cgaggatttgacgccgggcctggtgcggggaacgggctgatgccaacgccggggccgccc
gcatcctttccttcgctacaaggtttccagcccccgatgccaagtgcatcttttccgcag
ccgcatcagttcagccctgggccaagttttgcgacccaggctccacagcaagcagccgcg
ggcggcggactggctaagacagatttcggtcagaagaaatcgagaaagaagagtcgctgg
agcagcgagacacccgatcagaagacagtcattccgggcatgcccactgtcattccgcct
ggactgaccagagatcaagagagagcatatatagtccaactgcagattgaagacctgact
cgtaaactgcgtacaggagacctgggaatccctgttaaccctgaggacaggtctccctct
ccggagcccatttacaacagcgagggcaagaggttaaacacccgcgagtatcgcacgcga
aagaagatcgaggaggagcgtcactccctcatcactgagatggtcggactcaaccctgac
ttcaagcctcctgccgactataaacctccggccacaagagtcaatgacaaagttatgatc
ccccaagatgaataccctgaaatcaactttgttggtctgctcatcgggccacgtggtaat
acactgaagaatattgagaaggagtgctgcgccaagatcatgatccgggggaaaggttca
gtgaaggaggggaaggtgggcagaaaggacgggcagatgctgccaggggaggacgagcct
ctgcatgctctggtcaccgccaacacaatggagaacgtcaagaaagctgtggagcagatt
cgcaacattctgaagcaaggcatcgagacacccgaggatcagaatgacctacggaagatg
cagctgagggaactggccagactcaacggcacgctgagggaagacgacaacaggatcctt
cgtccctggcagaactctgagccccgcagcatcacaaacaccaccctctgtaccaagtgc
ggtggagcaggccacatctcctctgactgcaagtacaccagctctttcgctgcccacaga
gcaacaggtggcgagccccctcagtcggctcaggacaaggctcgtatggacaaggaatat
ctgtccctgatggctgagctgggggaggctccagtccccgcatctggtggaggacacaac
aactccccagcaggagcacctcgggccacgggacccaacagcacccagccaccgccgcag
acgcggcctccctggatgagctccgctccggctgagaacaggagcttccacggcatgcat
ggagggcctggtggccacggaggaccccacagctttcctcccccgatgcccaacatggga
ggcccccctatgcccccccaccccaacggcccgcctcccccctggatgcagccccctcct
cctcccatgggccagggtccaggacctcacggacaccccatgggcctgctgcctcctcca
atgggcatgatgccaccaccacctcctccccccagcaaccagccgcctccgcccccttct
ggacccctgccaccatggcagcagcaggctccacctccccctccaaccagcagcatggca
accagtacaccgttaccctggcaacagaataccaccaccacatccagccctggcacaggc
accctgcctccatggcagcagccccagcagcccgcagcctctggagcccagcccccacca
ccatggggcaccccgtccatggtgccgcctccccccggcgtccagcccccactgcctcca
ggcgcaccccctcctccccctccaccacctccaggctcaaccggcatgatgtatnngccc
ccaccaccccccccacccatggacccttccaactttgtcaccatgatggggatgggggta
ccgggcatgccccccttcggcatgcctcctgcccccccacctcctccccctcagaattaa
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