Plectropomus leopardus (leopard coralgrouper): 121961912
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Entry
121961912 CDS
T07454
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 domain and tetratricopeptide repeat-containing protein 1-like
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plep04131
]
121961912
Membrane trafficking [BR:
plep04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
121961912
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Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_2
TPR_8
SH3_1
TPR_7
TPR_10
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
121961912
NCBI-ProteinID:
XP_042367953
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All DBs
Position
23:3220134..3236073
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AA seq
1325 aa
AA seq
DB search
MSARSERKYRRRISADGQQXREAPETPNRPGRMVHGLSRDTPSLKGTVSTCEESFPTALP
VLLDVVRGPERLPADEELQEMLRGKLRILQADSTEVNALFTELSTHLISINSEEKVIFVK
FKTFEEIWKFTTYYTLGFLGRCMENLLLDQKFWLSSLEDHIAIEVSIQEDTLNLIYKGIL
MQEGSLFASCSTNQMFDSSTSGGDLYLEQGDIAQFEPPFLGSGWTVLCLADGARGTAPKP
VLEPVVPFYQWFLKSCAESILVGDGKPACEFPLEFARGTCLATEEYDADGPDELSLAPGD
CIIVVGLLVSCFDWFTGRKEATGEVGLVKTSLVKPSSDIYASEDIFLDGEEGTFFSQQED
KVIKETTASLKKKSQNDIGQNYKLDMISYKDSEKKTSPSSSSKVDTQQQTDLKRNIQSIL
DKGRDSLPDSPMTMNGTLEDSVLATEEKTTSPPCFTVYPVVEGNNNTENFIPLFSFLDGQ
DYKKEFGILYKLSSELLASSTFTGHSDEDELIAFLGVARETARKKRHFWSQTRLCFLLGK
LCAGRLKFSQARVYFEEALSVPRDGFTDLRLLASIYSNLVSIYLLQKNTESFFALTERLV
ALLLGIPYCLEYLEDNSALKYILKKAVLSQNKMAEARACHLLAKHHWNHSEGVKAVPYLE
RLLVLCAEAQSTWGISPSHEYLTLGRLYSELVLPHLSVSSARRASLQPSATLTDCLRSMV
LVLDNVSRLSGISQQETSIPPQVAPCLYQALSSSKVQGERNDQYHVLSHQLTLCLCQLFC
KHRMVGRAISHMHTLISNSLTALQVPVSVPERNSALIWLAWLHIDNNQPDLALDILEAVL
GSMPEHCTTPQEGVVLNMRGVALRCMGDIRRAAESYEAAVDICQEYEDMPNWAVAQANLG
LLCLKAGAKRLAQRHLTEAVQLFSELDEEGHIANFITVLLELGQHYVKQHQLDYGKGCYE
WALLLAINANLLDCQLTATQHLCHLYGCESPDQAQCIIYSQHQVQLLRHTGDRGQEGDAL
EAISQLYLSLGTERAYRAALDYTKSSLGIFIDLGCREKEAYGWLQAGKIYHLVDQTELVD
LYVQAAQDVALSTGDTKFLLKLLEAAGDIFFNSNQDRDKAITFYRDRALPIAVKSSSVHS
RLRLCNKLTELMLSLKLYEEALEFAQTALHISITLGERLNERVAYHRLASLYHCLDQYEL
AEHYYLKTLTLCPTPLLFDEETLYYVRVYRTLGDIIFYDLKDPFDAAGYYHLALAAAMDL
GNKRSQLQLCTRLATIYHNFLEDRELSLFFYQKARAFAAELNVRRINISPDQQYSSASQY
KTTRQ
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccaggtcggagcgcaagtaccggaggaggatctccgcagacggccagcagnct
cgggaggcgccggagacaccaaaccgacccggcagaatggtgcatggtttgtccagagac
accccaagtctgaagggaactgtatcgacatgtgaggaaagcttcccaacagctctgcca
gtgctgctggatgtggtcaggggtcctgagcgtcttcctgcagacgaggagttgcaggaa
atgctgagagggaaactgcgcattctacaagctgacagcaccgaggtcaacgctctgttc
acggagctgtccacacatctcatctccatcaacagtgaagaaaaagtgatttttgtgaaa
ttcaaaacttttgaggaaatctggaagttcaccacatattacacactaggtttcctgggt
cgctgtatggagaatctgttgttagaccagaagttttggctcagttctttggaggaccac
atcgcaatcgaggtctcaattcaggaggacactcttaacctgatctacaaaggcatcctc
atgcaggaaggttcattgtttgctagctgtagtaccaaccagatgtttgacagctccaca
tctggaggtgacctgtacctagagcagggagacatagcccagtttgagcctcccttcctg
ggctcagggtggacagtcctctgcctggctgatggagcccgagggacagcacccaaacct
gttctggagccagtcgtccctttttatcaatggtttctcaaatcctgcgcagaaagcatt
ttagttggtgatgggaaacctgcctgtgaattccctctggagtttgccagaggaacttgt
ctggccacagaggagtacgatgctgatggcccagatgagctgagcttggcacctggtgat
tgcatcatcgttgtgggactcctggtgtcttgttttgattggtttacagggaggaaggag
gcgacgggagaagtgggtctggtcaagacaagcctggtgaaaccgtcctctgacatctat
gcctcagaagatatttttttggacggagaggaagggacattcttcagtcagcaagaggac
aaagtcataaaggaaacaactgcctcactgaaaaagaaatctcaaaatgatattggtcag
aactacaaactggatatgatcagttacaaagactctgagaaaaaaacatcacccagctct
tcaagtaaagttgatacccagcagcagactgacctgaagagaaatattcagagtattctt
gataaaggcagagactcactgccagattcaccaatgaccatgaatgggactttagaggat
tctgtcctggctacagaggaaaaaaccacaagccctccatgttttactgtttatccagtt
gtagaaggaaacaacaacactgagaacttcattcccctcttctcttttttggacggacaa
gactacaaaaaagagtttggcattctctataagctaagttctgaactccttgcctcctcc
accttcacaggtcactcggacgaggacgagctgattgccttcctgggcgttgctagggaa
acagccaggaagaagcgacacttttggtcacaaactcgtttgtgctttctgttgggtaag
ctctgtgctgggaggttaaagttcagccaggcccgggtttactttgaggaagccctcagt
gtgccgcgagacggcttcacggacctcagactactggccagcatctactccaacctggtc
agcatataccttttgcagaagaataccgaaagtttctttgccctgacagagcgacttgtt
gccttgctattgggaatcccatactgtctggaatacttagaggataactctgctcttaaa
tacatcctaaagaaagctgttctctctcagaacaaaatggcagaggcccgagcttgtcat
ctattggcgaagcaccactggaatcattctgaaggggtgaaagctgttccttatcttgag
agactacttgttctttgtgctgaagctcaaagcacatggggcatctctcccagtcatgaa
tacctgactcttggaaggctgtacagtgaactcgtacttccccacctcagtgtcagttca
gccaggagagcttctctgcagccctctgctacactgacggactgccttagaagcatggtt
ctagttttggataatgtcagtagactgtctggtatctcacaacaggagacctccatccca
cctcaagttgctccatgtttataccaagccctttcctcaagcaaagtccaaggagaaaga
aatgatcagtaccatgttctgagccaccagcttactctttgcctttgccaactcttttgc
aagcacagaatggttggacgtgccatcagccatatgcatactctcatcagcaacagtcta
accgcactgcaagtccctgtctctgttccagaaagaaatagtgccctcatctggctggca
tggcttcatattgacaacaatcagccagatcttgctttggatatcctggaagctgtccta
ggttccatgccagaacactgcactaccccccaggaaggtgtggtcctaaacatgcgtggt
gtggcactccgatgtatgggtgacatccgaagggcagcagagagttacgaggctgctgtg
gacatctgtcaagagtatgaagacatgccaaactgggctgtggctcaggctaacctcggg
ctgttatgtctaaaggctggagccaaaagactagcacagagacacctgactgaggccgtg
cagctcttctctgagctggatgaagaaggtcacattgcgaacttcatcacagtgttactg
gagctggggcagcattatgtgaagcagcaccagctggactatgggaaaggatgctatgag
tgggctctgctgctggctatcaacgcaaatctgttagactgccagctgactgcaacccaa
cacctgtgccatctgtatggctgtgagagtccagaccaggcccagtgcatcatctacagc
cagcaccaggtccagctgctgagacacacaggagacagaggacaggagggtgacgcactg
gaagctatcagccagctctacctctcgctgggcacagaaagggcatacagggcagctctg
gactacaccaagagcagtctgggtattttcattgacctgggctgcagggagaaggaggcg
tatggctggctgcaggcggggaagatctaccacctagtggaccagactgaacttgtggac
ctttatgtccaggcagctcaggatgttgctctgagtacaggagacaccaagttccttctg
aagcttctggaagctgcaggagacattttcttcaatagcaaccaggaccgagacaaagct
atcaccttctacagggaccgtgcccttcccatcgcagtgaagagcagcagcgtgcactcc
aggctcaggttgtgtaataagctgactgaactgatgctcagtctcaagctgtatgaggaa
gctttggagtttgcgcagactgcactacacatcagtatcacactgggtgagcgtctgaat
gagcgagtggcttaccatcgtctggcctctctgtaccactgtctggaccagtatgaactg
gctgaacactattacctaaaaaccctgaccctatgtccgacacctctgctgtttgatgaa
gagacactgtactatgtccgagtgtaccggacgctgggggacatcatattctatgacctg
aaggacccgtttgacgctgcaggctattaccacctggctctagctgcagccatggatctg
ggcaacaagaggtctcagctgcagctgtgcacccgcctcgccaccatctaccacaacttc
ctagaggaccgggagctctctctcttcttctaccagaaggctagagcatttgcggcagag
ctgaacgtgaggaggattaatatctcaccggatcaacagtatagcagcgcctcacagtac
aagaccaccagacaatag
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