KEGG   Plectropomus leopardus (leopard coralgrouper): 121962341
Entry
121962341         CDS       T07454                                 
Symbol
col4a5
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
plep  Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04382  Cornified envelope formation
plep04510  Focal adhesion
plep04512  ECM-receptor interaction
plep04518  Integrin signaling
plep04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:plep00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121962341 (col4a5)
   04518 Integrin signaling
    121962341 (col4a5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121962341 (col4a5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121962341 (col4a5)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    121962341 (col4a5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:plep04147]
    121962341 (col4a5)
   00536 Glycosaminoglycan binding proteins [BR:plep00536]
    121962341 (col4a5)
Exosome [BR:plep04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   121962341 (col4a5)
Glycosaminoglycan binding proteins [BR:plep00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   121962341 (col4a5)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 121962341
NCBI-ProteinID: XP_042368515
LinkDB
Position
23:13265069..13318047
AA seq 1682 aa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NT seq 5049 nt   +upstreamnt  +downstreamnt
atgaataaagacttgaagagcctgcgacagctcgccgtgcctctgctcttcctcgtcctg
tgcgtcgccgtgcagcaatccgactctgcggcttgccatggatgtgtgggatccaaatgt
gactgcagcggagtaaaaggaagcaagggtgagaggggtttcccgggtttaaccggacag
ccaggagtcccaggattccccggacctgaggggccgattggacccagaggagagaagggt
agcgacggacctcaaggaccatatggtccaaagggaataagagggccagctggattgcca
ggatttccaggaacgccaggacttccaggtctaccagggcaggatggacctccaggcccg
agaggagtgccaggatgcaacgggacaaagggtgagaggggtttcccaggaagctcagga
atccccggacagcagggacggccgggtccacctggtctgccagggcaaaagggtgaccca
ggtgacatcatttccaccaatcgctttggagacaaaggagcagtgggattacctggactg
ccaggcactcctggagctcctggaccccccggttcacagggtccactcggccctccagga
cccagaggtattgagggtcgcccaggtcctccaggtctgcctggaccaaagggaaacatg
gggctgaacttccaaggacctaaaggagagaagggtgaacccggtctgccagggcctcct
ggtcctcccgggcaggtgggagaacagaagagaccacctgagacagaaatccagagagga
gacaagggtgatccaggacctccaggtcccgccggtgatccaggatatccaggacctcct
ggtccctcaggaggccagaaaggagaaaagggagaaccaggagaagcaggcaaacgaggc
aaaccaggcaaagatggcgatcctggttctccaggtttccccggaatcaaaggagaccca
ggcctgccaggtcctccaggcagggatggagagagaggaataaagggtgaacgtggatat
ccaggcccaccaggagtggtgattggcagagagacaggaggtcaggtcggccctaaaggt
gaacccggtttccccggatcacctggactcaaaggggacaggggatcaccaggttttaca
ggacctccaggagcaccaggacttccagctatcggtggtggtggtcagcccggacctcca
ggttttccaggagagagaggtcagaagggagaaaccggcgctccaggattgtctttgcca
ggtccccctggacgtttggggtctcccggttcccagggtcctccaggtctcccaggacct
ccaggcttttccacagcaggacaaaactgtgtctctggagagcccggacgtcctggtgtg
cagggagagagaggttacccaggagaggcgggtcagaaaggtgagaagggagacacctgt
gtgaactgctttggcagtaccagtggcatcccaggacccccaggacctgcaggacagccc
ggatttcccggtagtcctggtgccccaggtatcaaaggagacagaggattcccaggaaca
cctggcgctgtgggaccccctggttcacccggtcctcaaggttctccaggattccccgga
gagaagggagacccaggtgaagccatcacagtcagcggtgtgaggggagagaaaggtgac
actggcttccctggaccacccggtctgcctggtctggatggtcgacccggtcgtgatgga
cagcctggatctcctggagccaaaggagctcctggctctctgctggtgaaaggagaacgt
ggtaaccccggtgagccagggtctccaggtattccaggagacaggggtcctccaggaagc
cctggcttcggacctcagggatcttcaggagagaaaggtgtccagggtgtctcaggaaga
cctggagctcccggcgcacctggtgctaaaggtgaaccaggcctgacggtggctgagaaa
ggcttaccaggacccagaggactggatggagagccaggattgcccggctcaccaggtagt
ccaggtcagcctggacagaatggtttccctggtatacccggagcgaagggtgagcctgga
ctcccaggcatcggactcccaggacccccaggagctaaaggattcccaggtatccccgga
caaccaggagctcctgcaggaccaggaagaccaggcgtagatggactccctggtcagcct
ggattccctggacccaagggtgagcctggctttggccttcctggtcccccaggtttacct
ggagtgcctggatctaaaggtttccctggaccaaagggagatcctggtttccctggtggc
cctggtacacctggacgatctggatttgatggcggtccgggagctaaaggtgaacccggt
atacctggtatacctggagctcgtggcccacctggatctgccacctctggctcactgggg
caaccaggctcccctggatcccctgggccaatgggaccaccaggattccctggatcaaac
ggagagaagggcgaccccggccctccaggtcttgatatcccaggtctgccaggtgataga
ggaaccccaggtttcccaggttccccaggaccagtcggaaccccaggacctcctggagga
cctggacgggacggcctgcctggactgccaggtcagaaaggagacatgggtcctatggga
cctccaggaccttctggaggaccaggaggtccaggagggcctggcgcttctggacttaaa
ggtgaacctggattcccgggcagagatggagcacctggcggtcctggtggtaaaggagag
agaggagaccctggtgtccagggaccgccgggagccagccagccacctatggtcacaaag
ggagccgcaggagatcccggactaccaggtacaccaggtcttccaggtcagaaaggtatt
cctggtctcaccggtgaccctggactgccaggagcagatggacgccctggactccccgga
ccatcaggtcttaaaggagagcctggtatcccaggaggcccaggtagtcctggaagtcca
ggattaaagggtggcatgggagaaatgggtttcccaggaccatcagggcaaaagggtcta
ccaggtcagtcaggtaggcctggatcccccggacagccaggaggacccggtttccctgga
gccaaaggtgaaccaggcactgctggagttggaccacccggacaaactggacccaagggt
gaaccaggccaaccagggttcccaggaagtccaggacttaaaggaagtccaggatcaccc
ggtctcccaggtttaccaggaggaccaggatctaaaggcgaccctggactcccaggattc
caaggtcctcccggtgtccctggtcccaagggtcttgatggtgggcccggtgccccaggt
ctcactggagctcctggcagaccaggagagtctggcaagccaggaggaccaggattgcca
ggagagaagggtcaggcaggaagggacgggatcccaggacctgctggagtcaaaggagag
ccagggcttcctggttacggtggtcccggtccctctgggcttccagggttgccaggtgca
aagggagacccaggtcttcccggcccatctggcagtcccggtttccccggcaccaaagga
gaggctggtttccctggtagcccaggtcaaccaggttcccctggacctcctgggcctgta
ggactggctctgcagggccccaaaggactccaaggacctccaggaccacctggaagagca
ggtgcacccggaccagagggtccccgtgggcccgcaggaagcggcggcattaagggagag
aaaggtattcccggcgctcccggccagccaggcttccccggacagaagggagagggtggc
actcctggatactctggtccctctggccttcccggtgctcctggtctgaaaggagatatc
ggtctgcctggtgttcctggattccctggaccaaagggagacccaggacttcccggtggc
agtggccttcctggtgaccctggagacatcggacctgctggccctcccggtgaccccggt
gtacctccggctcctattgtggtgaagggagaacgtggaccccctggtcctcagggtctg
cctggtggtcggggactgcctggctctcctgggcgtgatggacttccaggttcggctggt
gagcctggagattctggtctggagggtcctcctggtttcagtggtccacctggcaggaag
ggagacggcggacccgctggtcagcctggtcagcgtggctaccccggtccccctggttca
gacggtccacagggtcttcccggtcctccaggttcagtctctgcagctcatggcttcctc
atcactcgacacagccaaggacaggaggtgccctactgtcccgaaggaactaacctcatc
tacgacggctactccctgctgtacgtgcagggcaacgagagagcgcacggacaggatctt
ggcacggccggcagctgtctgcgcaggttcagcaccatgcctttcatgttctgcaacatc
aacaacgtctgcaacttcgcctcccgaaacgactactcctactggctgtccacacctgag
cccatgcccatgtccatggcgcccatcactggagagaacatcaagccttacatcagcagg
tgtgcagtgtgtgaagctccagccatggtgattgcagtccacagtcagaccatccagatt
cccacttgcccttcgaattgggaagctctgtggataggatactccttcatgatgcacacc
agcgcgggtgcagagggctccggtcaggccctggcctcccccggctcctgcctggaggag
ttccgcagcgcccccttcatagagtgccacggcagagggacgtgcaactactacggcaac
tcctacagcttctggctggccacggtggaaccgtctgagatgttcaggaagccccagtcg
gagactctcaaggcgggtaacctacggacgcgcgtcagccgttgcgtggtctgcatgaag
aggacgtaa

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