Plectropomus leopardus (leopard coralgrouper): 121962346
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Entry
121962346 CDS
T07454
Name
(RefSeq) cartilage oligomeric matrix protein
KO
K04659
thrombospondin 2/3/4/5
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04145
Phagosome
plep04510
Focal adhesion
plep04512
ECM-receptor interaction
plep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121962346
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121962346
09144 Cellular community - eukaryotes
04510 Focal adhesion
121962346
09142 Cell motility
04820 Cytoskeleton in muscle cells
121962346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plep04131
]
121962346
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plep04147
]
121962346
00536 Glycosaminoglycan binding proteins [BR:
plep00536
]
121962346
Membrane trafficking [BR:
plep04131
]
Endocytosis
Phagocytosis
Opsonins
121962346
Exosome [BR:
plep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121962346
Exosomal proteins of colorectal cancer cells
121962346
Exosomal proteins of bladder cancer cells
121962346
Glycosaminoglycan binding proteins [BR:
plep00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121962346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
COMP
EGF_3
EGF
cEGF
Motif
Other DBs
NCBI-GeneID:
121962346
NCBI-ProteinID:
XP_042368523
LinkDB
All DBs
Position
3:16203769..16216958
Genome browser
AA seq
748 aa
AA seq
DB search
MLWFLLLNCALCMGGHAAAGQRDGEIISQIKMTNLALAEIRELLKQQIKEIVFLKNTVME
CEACGMGGMQPRPSCVPNPCHPGVKCKETPQGIKCGPCPEGMEGNGTHCTDVDECTVMPC
HMGVRCINTSPGFRCGACPPGYTGPQIQGVGLAYATANKQVCRDINECEGLNNGGCVENS
ICMNSPGSFRCGPCKTGYVGDQRRGCKPERACGNGQPNPCHASAGCTVHRDGVIECQCGV
GWAGNGYLCGPDIDIDGFPDERLACPERNCNKDNCLTVPNSGQEDADGDGIGDACDDDAD
GDGIPNMQDNCVLVPNVDQRNIDEDDFGDACDNCRAVKNNDQKDTDVDKFGDECDEDIDG
DGILNHLDNCKRVPNTDQIDRDGDKVGDACDSCPYVPNPDQTDVDNDLIGDPCDTNKDSD
GDGHQDSRDNCPAVINSSQLDTDKDGIGDECDDDDDNDGIPDLLPPGPDNCRLIPNPLQE
DSNGDGIGNICERDFDNDTIIDTIDVCPENAEVTLTDFREYQTVVLDPEGDAQIDPNWVV
LNQGREIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVM
WKQVEQIYWQANPFRAVAEPGIQLKAVKSDTGPGENLRNALWHTGDTSDQVKLLWKDARN
VGWKDKTSYRWFLQHRPADGYIRVRFYEGPQMVADTGVIIDATMRGGRLGVFCFSQENII
WANLRYRCNDTLPEDFDTYRAQQVQLVA
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggtttctgctgctgaactgtgcactctgcatgggaggacacgctgcagctgga
caaagagatggagaaattatcagtcaaattaaaatgacgaatctcgcactggctgagatc
agagagcttctgaaacagcagattaaagagatcgtattcctgaagaacactgtgatggag
tgtgaagcttgtgggatgggaggaatgcagcctcgtccctcctgcgtgcccaacccctgt
cacccaggggtgaagtgtaaggagacacctcagggtattaagtgtggaccctgtccagag
ggtatggagggcaatggtacccactgcactgatgtggatgagtgtaccgtgatgccatgc
cacatgggtgtgcggtgcataaacacatccccaggtttccgctgtggtgcctgtcctcct
ggatacactggcccccagatccagggcgttggccttgcctacgctacagccaacaaacag
gtgtgcagagatatcaatgagtgtgaaggccttaacaatggaggctgtgtggagaactcc
atctgtatgaacagccctggctcattcaggtgtggtccctgtaagaccggctatgttggg
gatcagcggcgtggctgtaagccagagagagcctgtgggaatggccaacccaacccctgc
cacgccagcgctggatgcacagtccatcgagatggtgtaattgagtgtcagtgtggagtc
ggatgggctggcaacggctacctctgcgggccggacattgacattgatggttttcccgat
gagagactggcctgtcctgagaggaactgtaacaaggataattgtctcaccgttcccaac
tctggtcaagaagatgctgacggtgatggaattggagacgcctgtgatgacgatgcagat
ggagatgggatccccaatatgcaggataactgtgtgttggtgcctaacgtggaccagaga
aacattgatgaggacgattttggtgatgcctgcgacaactgccgtgccgtcaaaaacaat
gaccaaaaagacactgatgtggacaaatttggtgatgagtgtgacgaagacattgacggg
gatggaatcctgaatcacctggataattgcaaaagagttcccaacactgaccagatagat
cgtgatggagacaaagtgggagacgcctgcgacagctgtccttatgtcccaaaccctgac
cagacggatgtggacaatgacttgattggagacccctgtgacactaacaaggacagtgat
ggtgacggtcaccaagactctcgggacaactgtccagccgtcatcaacagctcccaactg
gacaccgacaaggacggcataggagacgagtgtgatgatgacgacgataatgacggcatc
ccagacctgctgccacctggtcctgacaactgccgtctaatccctaaccctctgcaggag
gactctaatggtgatggtattggcaacatatgtgagagagatttcgacaacgacactatc
atcgacaccatcgacgtctgtccagaaaacgctgaggtcaccctcactgacttcagggag
taccagactgtggttttagatccggagggagatgcacagatcgaccccaactgggtggtg
ctgaaccagggaagagagattgtccagactatgaacagtgatcctgggctggctgttggt
tacacggctttcagcggcgtggattttgaagggacgtttcacgtaaatacggtaacggat
gacgactatgcaggatttatctttgggtaccaggacagctccagtttctacgtggtgatg
tggaagcaggtggagcagatctactggcaggcgaacccgttcagagccgtggcagagcca
ggcatccagctgaaggctgtcaagtcggacacgggtccaggtgaaaatctgaggaacgcc
ttgtggcacactggtgacacgagcgaccaggtcaaactactgtggaaagacgcacgtaat
gttggctggaaggacaaaacttcctaccgctggtttctccaacaccgacccgctgacggc
tacatcagggttcgtttttacgagggtcctcagatggtggcggacacaggcgtcatcata
gacgccacaatgagaggaggtcgactgggagtcttctgcttctcccaggagaacatcatc
tgggccaacctgcgctaccgctgcaacgacactcttcctgaggactttgacacctacaga
gcccagcaggtgcagctggtggcctga
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integrated database retrieval system
