Plectropomus leopardus (leopard coralgrouper): 121962353
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Entry
121962353 CDS
T07454
Name
(RefSeq) ras-related protein Rab-39B
KO
K07925
Ras-related protein Rab-39B
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121962353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plep04131
]
121962353
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
plep04031
]
121962353
Membrane trafficking [BR:
plep04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
121962353
GTP-binding proteins [BR:
plep04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
121962353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
AAA_22
VGCC_beta4Aa_N
ATP-grasp_5
TniB
Motif
Other DBs
NCBI-GeneID:
121962353
NCBI-ProteinID:
XP_042368534
LinkDB
All DBs
Position
23:14721955..14734111
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AA seq
213 aa
AA seq
DB search
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHDWLEEARSHVQPHSIVFLL
VGHKCDLEAQRQVTRQEAEKLAGAYGMRYVETSARDAINVEHAFTELTRDIFALVRSGDI
TIQEGWEGVKSGFVPNVVHSSEEVTKSDRRCLC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgatatggctctatcagttccggctgatcgtcatcggggactccacggtgggc
aagtcgtgtctgatccggcggttcacggagggacgcttcgcccaggtgtcggacccgacc
gtcggcgtggacttcttctcgaggctggtggagatcgagcccggcaagaggatcaagctg
cagatctgggacaccgcgggtcaggagcgcttcaggtccatcaccagggcttactaccgt
aactcggtgggcgggctcctcctgttcgacatcaccaaccgccgctctttccagaacgtc
cacgattggctggaggaggcgcgcagccacgtccagccccatagcatcgtcttcctattg
gtcggccacaagtgtgatctggaggcacagcgccaggtgacccgccaagaagcagagaag
ctggcgggggcgtacgggatgcgctatgtggagacgtcagcccgtgacgccatcaacgtg
gagcacgccttcaccgagctgaccagagacatcttcgccctggtgcggtccggcgatatc
acaatccaggagggctgggagggcgttaagagcgggtttgtccccaatgtggtgcactcc
tcggaggaagtgaccaagagtgaccgccgctgtctgtgttga
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