Plectropomus leopardus (leopard coralgrouper): 121962683
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Entry
121962683 CDS
T07454
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03030
DNA replication
plep03410
Base excision repair
plep03420
Nucleotide excision repair
plep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121962683 (rfc4)
03410 Base excision repair
121962683 (rfc4)
03420 Nucleotide excision repair
121962683 (rfc4)
03430 Mismatch repair
121962683 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plep03032
]
121962683 (rfc4)
03036 Chromosome and associated proteins [BR:
plep03036
]
121962683 (rfc4)
03400 DNA repair and recombination proteins [BR:
plep03400
]
121962683 (rfc4)
DNA replication proteins [BR:
plep03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
121962683 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
121962683 (rfc4)
Chromosome and associated proteins [BR:
plep03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
121962683 (rfc4)
DNA repair and recombination proteins [BR:
plep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
121962683 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
121962683 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_assoc_2
AAA_16
AAA_22
AAA_11
AAA_30
AAA_24
DUF815
Mg_chelatase
Gp44_lid
SLFN-g3_helicase
AAA_14
RuvB_N
AAA_19
AAA_28
ResIII
AAA_5
AAA_7
Hydantoinase_B
AAA_3
Motif
Other DBs
NCBI-GeneID:
121962683
NCBI-ProteinID:
XP_042368869
LinkDB
All DBs
Position
3:complement(1868228..1876682)
Genome browser
AA seq
358 aa
AA seq
DB search
MQAFLKGATVQSTRPQKDKAAAGPSSEKKAKAIPWVEKYRPKCVDEVAFQEEVVAVLKKS
LEGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVVREKVKN
FAQLTVAGTRPDGKPCPPFKIIILDEADSMTAPAQAALRRTMEKESRTTRFCLICNYISR
IIEPLTSRCSKFRFKPLANQIQEERLLEICDKENLKYTKESIAALVRVSEGDLRKAITFL
QSAARLNVDKEITEHAVIEIAGVIPDKRIENLLQICFTGTFERLEIAVRNMVDEGYAASQ
ILSQLHDSIIEQDLSDKQKSAITEKMAVVGKCLSDGANEYLQMLSLCSVIMQQATQHN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccttcttgaaaggagcgactgttcagagtacgagacctcagaaagacaaggca
gcagcaggacctagctcagagaagaaggccaaggctattccctgggtagaaaaatacagg
ccaaagtgtgttgatgaggtggcctttcaggaggaggtggtagctgtgctgaagaagtct
ctggaaggagcagatcttcccaaccttctcttttatggccctcctggaacaggaaagacc
tccaccatcttagctgctgcaagagaactttatggtccagagctgtacagacagagagtg
ctggagctcaacgcctctgatgaacgcggtatccaggtcgtcagagagaaggtcaaaaac
tttgcccagctcaccgtggctgggactcgcccagatgggaagccgtgtcctccgtttaag
atcatcatcctggacgaggcggactccatgacggcaccagcccaggccgctctgaggcgg
accatggagaaggagtcccgcactacccgcttctgcctcatctgtaactacatcagcagg
attattgagcctttgacctccagatgttccaaatttcgctttaaacctttagccaatcag
atccaagaggagcgcctgctggagatctgtgacaaggagaacctcaagtacaccaaagag
agtatagcagcactggtgagggtgtctgagggagacctgcgcaaagccataaccttcctg
cagagtgctgcgcgcctcaacgtcgacaaagagatcacagagcacgccgtgatcgagata
gctggggtgattcctgacaagaggattgaaaacttgctccagatctgcttcacagggaca
tttgagagactagagattgcagtcaggaacatggtggatgaaggctatgcggcctcacag
atcctgagtcagcttcacgactcgatcatagaacaggacctgagtgacaagcagaagtca
gccatcacagagaagatggcggtggtgggtaagtgcctgtcagacggagccaatgagtac
ttgcagatgttgagtctgtgttcagtcatcatgcagcaagccacccagcacaactga
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integrated database retrieval system
