Plectropomus leopardus (leopard coralgrouper): 121962723
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Entry
121962723 CDS
T07454
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04136
Autophagy - other
plep04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121962723 (atg13)
04136 Autophagy - other
121962723 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plep04131
]
121962723 (atg13)
03029 Mitochondrial biogenesis [BR:
plep03029
]
121962723 (atg13)
Membrane trafficking [BR:
plep04131
]
Autophagy
Autophagosome formation proteins
ULK complex
121962723 (atg13)
Atg1 complex
121962723 (atg13)
Mitochondrial biogenesis [BR:
plep03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
121962723 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
121962723
NCBI-ProteinID:
XP_042368916
LinkDB
All DBs
Position
24:5129420..5140673
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AA seq
541 aa
AA seq
DB search
MDSGLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSVLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLSGLGEGFQTVRVGVVGTPV
GTVTLSCAYRTNLAFMSNRQFERSAPIMGIIVDHFVDPPCSSQRPANMGHPCNYRAPDEE
DGGYAGVQDSQEVCTTSFSTSPPSQCVCTLSPSPSKLSKPLPLDSLPLPLAPGLVTHTLY
ASRLSYQPPALAGAAEICHPAANPNQMLHAGKDHGGVVLVPTQPLHAADAHLTAEHAANT
PGSSGDDDGLSHSGERRRDEGRRSVSPSDPVESLNAFTRKIGAFVNKPNTQITAASLDLP
FAEFAPRGLDSEENDPMVQPPDSPPCPSPLQASLHSQGSEGSGQQDDFVMVDFRPAFSKD
DLLPMDLGTFYREFQNPPQLASLSLHISSQSMADDLDSLPEKLAVYEKNIDEFDAFVDML
Q
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggacagtggcctgagtccccaggataaaaaagacttggacaagttcattaaattcttt
gccttgaagactgtccaggtgattgtccaagctcgtcttggagagaagatctgcactcgc
tcgtcctcatcgccgactggctctgactggtttaatttggctatcaaagacatcccagaa
gtgactcatgaagccaagaaggcgctggccggccaacttccaggcatcggacgctccatg
tgtgttgagatctccctgaagacttcagagggagactcgatggagttagagacttggtgc
ctggagatgaatgaaaagtgtgataaggacatcaaggtgtcatacacagtttacaaccgt
ctgtctgtcctcctgaagtctctgctggccatcaccagagtcacacctgcgtataaactc
tccagaaagcagggacacgattatgtcatattatacaggatttatttcggagaagttcag
ttgagtggattaggagaaggttttcagacggtgcgtgtcggcgtcgttggcactcctgtc
ggcacagtcacactttcatgtgcttaccgcaccaacctggcatttatgtccaacagacag
tttgagcggtcggctccgatcatggggatcattgtagatcactttgtggatcctccctgc
agcagccagcgacctgcaaacatggggcatccctgcaactacagagctccagatgaggag
gacggaggatatgcaggagttcaggattcccaggaggtctgcaccacctccttctccacc
tcccctccctctcagtgtgtgtgtacactgagtccttcgccctctaaactgtccaagccc
ctccctctggacagtctgccgcttccattggctcctggacttgtcactcacactctgtat
gcttccaggttatcatatcagcctccagctctagcaggagctgctgagatttgtcaccct
gctgccaatccaaaccagatgttgcatgctgggaaggatcatggaggggttgtgttggtt
cccacgcagcctcttcatgcagctgatgctcatctgacagcagagcatgccgccaacaca
cctggcagcagtggtgatgatgacggcctgtcgcacagcggagaaagacggagggatgaa
gggaggaggagtgtttctccctctgaccctgtggagtctctcaacgcatttacaaggaaa
atcggagcctttgtcaataaacccaacacacagataacggcagccagtctggacctgcca
tttgctgagtttgctcctcgaggcctggactcagaggagaatgatcccatggtgcagcct
ccagactctcctccgtgcccgtcccccctgcaggccagcctccattctcagggctcagag
ggatcggggcagcaggatgactttgtcatggtcgactttcgtccagccttctctaaagac
gacttgttgccgatggatctgggaactttctacagagagtttcaaaaccctccacagctg
gccagcctctcactacacatcagctcccagtcaatggccgatgacctggactcgctgcca
gagaaattggccgtttatgagaaaaacatcgacgagtttgacgcttttgtggacatgctc
caatag
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