Plectropomus leopardus (leopard coralgrouper): 121962797
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Entry
121962797 CDS
T07454
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121962797
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
121962797
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
UBA_N4BP1_C
UBA_N4BP1
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
121962797
NCBI-ProteinID:
XP_042369033
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All DBs
Position
24:complement(8685143..8704758)
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AA seq
961 aa
AA seq
DB search
MGQKDHVEAGAGHILDLVLDLEYLHVAGADRQAGCADGPPAMEEQGKRSGTSSTASSPPP
AALEENAGSDAECELAVSSSATLAVVPDPDGGEGGLTHSKNTHQPLCRTQCVDLGTEGPP
ELPSELSLELELDTPAQSSPSSPCKHPPEPPSEPSSSEPEAGGKEYQAKLEFALKLGYSE
ETVRLVLSKLGPDTLINDILGELVKLGTKSDSEQPPGSLASTSSSSSSSSSCGCSDLLDS
QRSDSPCPSDSLCDQDNLRPIVVDGSNVAMSHGNKEVFSCQGIQLAVDWFVERGHHDITV
FVPAWRKEQSRPDAPITDQEILRRLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYESD
GIIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKRPV
MPEQKKQPCPYGKKCTYGHKCKYYHPERGAQPQRAVADELRASAKTCVTTKNQGDTGLVK
SHSVPAGSIEAKKGAPKRQSDPSIRALSYSDAEEKLLAKGRAESQKSSMCGSSSSSVSIS
MSSAPGGPPSSFNLSQDQQSRAATPHSLLAPSHDLYPHSESPDLSYYSVTRAYSGLSLSS
RRSPDCRFPNDTDLRLGSVGSAGSECGSESSVSCGSSCDSYSERQCPGCPPDTLLEDSVH
FANPHSRLYPHHAASNHDLCGLHPADYTNIQHSHASNTGVHSYHLSVARGQSCAHNQPPP
EAPPKRPLYPLPPHLQHHPLAARSSCPGDYHSLTQSNPHPPGSPLGRCLAPTRGESVSDS
HLYEHLSTSHHHHRTKALPSWDSYYRQPPLPPSRYEPSACQSLPDTRQSSWHTPPWAQDG
YAQHHSSHPALHPSPTHYLNHPPPPAHSPHPPHPSSTPLTPYPPHSAHLTVPSHAPSSYM
QQHPESPAHSRYGDMREKVYVNLCNIFPSELVSRVMARSPHITDPQQLAAAILAEKAQTG
Y
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgggccagaaggaccatgtggaggcaggagcaggccacatcctcgacctggtgctggat
ttggagtatctccacgtagcaggggctgaccggcaggctggctgcgctgacgggccccct
gctatggaggagcaggggaagcgctccggcaccagcagcaccgccagttctcctccaccg
gctgcactggaggaaaatgccgggtctgatgcagagtgtgagctggcggtttcttccagc
gccaccctcgctgtcgtccccgacccggatggaggagagggagggttaactcacagtaaa
aacacccaccagccgctttgtcggacccagtgtgtggacttaggcactgagggtcccccc
gagctcccgtctgaactctcactagagcttgaactcgatactcctgcgcagtcctcaccc
agctcgccgtgtaaacacccacctgagcctccgtccgaaccctcctcgtcggagcccgag
gccggtgggaaggagtaccaggccaaactggagtttgccctgaagctgggctactctgag
gagacggtgcgactggtgctatccaagctaggccccgacactctcatcaatgacatactg
ggagagctggtcaaactgggcaccaagtcagacagcgagcagccgcctggatcattagcc
tctacctcatcttcttcatcctcctcttcctcttgtggctgttctgatttgcttgatagc
cagcggtcggactcgccctgtccctcagactctctgtgtgaccaggacaacctgcggcca
atcgtggtggacggcagtaatgtggccatgagccatggcaacaaggaagtgttttcgtgt
cagggcatccagctggctgtggattggttcgtagagcgtggccatcacgacatcacagtg
tttgtgcctgcgtggaggaaagagcagtcccgccctgacgcccctataacagatcaggag
attttgcgtcgcctagagaaggaaaagatcttggtcttcactccttcgcggcgtgtccaa
ggtcggcgcgtagtttgctatgatgaccgtttcatcgtcaagctggcctatgagtcagat
ggcatcatcgtctccaatgataactacagagacctggcgaatgagaagcctgagtggaaa
aagttcatcgatgagcgtctgctcatgtattccttcgtcaatgacaaatttatgccccca
gatgatcctctaggtcgtcatggtcccagcttggacaacttcctgaggaaaagacctgtc
atgcctgagcagaaaaaacagccttgcccatacggaaagaagtgcacttatggccacaag
tgtaaatactaccacccagaaagaggtgctcagcctcagcgtgctgtggctgacgagctg
cgtgccagtgccaaaacctgtgtcaccacaaagaatcagggggacactgggctggtgaag
agccacagtgttccagctggcagcattgaggcgaaaaaaggcgccccgaaaagacagtct
gaccccagcatccgagctctgtcgtacagcgatgctgaggagaagctgctggcaaaaggg
agggcggaaagccagaaaagcagcatgtgtggcagcagcagtagcagtgtgagtataagc
atgtcctcggccccaggaggccctccatccagttttaacctttcccaggaccagcagtcc
agagcagcaacaccccatagtctcctagcccccagccatgacctctaccctcactctgag
tctccagatttgagctactactcagtaacacgtgcctactctggcctgagcctctcctcc
agacggagcccagactgtcgcttccccaatgacacagacctgcggctcggctcagtgggc
tcagcaggatcagaatgcggcagcgaaagcagcgtaagttgtggtagcagctgcgactcg
tacagtgagcggcaatgtcctggatgcccaccagacaccctactggaagacagcgtccat
tttgccaatccccacagccggctgtatccccatcatgccgcatcaaaccatgacctatgt
ggccttcatcctgcggattacacaaatatccagcacagccacgcgtctaataccggagta
cacagctaccacttgagcgtggcccgcgggcagagctgtgctcacaatcagcctccacca
gaggcgcccccaaagcgccctctctaccccctgccccctcacctccagcatcatccgctg
gctgcacgctccagctgcccaggcgactaccactccctgacacagtccaaccctcacccc
cctggctcccctcttggccgttgcctggcccccacacgaggagaaagtgtgtcagactca
catctgtatgaacacctctccacatcgcaccatcaccaccgcacaaaagctttgcccagc
tgggactcatactacaggcagcctccgttgccgccctccaggtatgagccgtcggcctgc
cagagcctgccagacacacgccagtcatcctggcacacccctccttgggcacaggacggc
tacgcccagcaccactcctcccacccagctctccacccatccccaacacattacttaaac
caccctccacctcctgcccactctcctcacccgcctcatccatcaagtactcctctcacg
ccgtacccgcctcacagcgctcacctgactgtgccctcccacgctccttcctcctacatg
cagcagcacccagaatcccctgcgcacagccgctacggggacatgagggagaaagtgtac
gttaacctgtgtaacatcttcccttcggagctggtgagccgggtgatggccaggagccct
cacatcacagacccccagcaactggcagccgccatactcgcagagaaagcccaaactgga
tactaa
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