Plectropomus leopardus (leopard coralgrouper): 121963002
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Entry
121963002 CDS
T07454
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121963002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plep04121
]
121963002
Enzymes [BR:
plep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121963002
Ubiquitin system [BR:
plep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121963002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
TRIM_CC
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
PRY
FN3_DSCAM-DSCAML_C
zf-C3HC4_3
zf-RING_2
Pur_ac_phosph_N
zf-C3HC4_2
zf-RING_5
NDNF
Motif
Other DBs
NCBI-GeneID:
121963002
NCBI-ProteinID:
XP_042369291
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Position
24:10585585..10653906
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AA seq
689 aa
AA seq
DB search
MDTLESELTCPICLELFEDPLLLPCAHSLCFGCAHRILISHCATNESVQSIGAFQCPTCR
YVISLSPERGLEGLKRNVTLQNIIDRVQRASSSAGVPLPLPLPAPHSGPNSPGDEGSNRL
ALVPVSAAMSSPGTPPEPVQCQFCEQDPPQDAVKTCVTCEVSYCEECLRATHPNKKPFTG
HRLIEPMPDSHLRGLQCLEHEEEKVNMYCVTDDQLICSLCKLVGRHRDHQVAALSDRFEK
LRQALDTNLSNLIKRNNELESLMGKLIQTCQHVEVNASRQEGKLLEECDVLIDIIQQRRQ
IIGNKIKEGKAQRIRKLAQQISNCKQCIERSTALITQADQTLKETDHARFLQTAKSINER
VSMATASTQVLIPEIHLTDTFDSVALDFTREKKLLENLDYLTAPSAPCIREELCTASYDT
ISVHWTSDDEFTVVSYELQYAIFTGQSNIASLCNSLESWMIVPNIKQNHYTVHGLQSGTK
YIFVVKAINQAGSRSSEPGTLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETTSKKGHS
QERFSSQNSYGVVGNVYIDSGRHYWEALIGGSTWYAVGIAYKSAPKHEWIGKNSASWVLC
RCNNSWVVRHNSKELAIEPSPHLRRVGVLLDYDAGYVTFYDAVGSQHLHTFHVSFVQPVC
PVFNVWNKCLTILTGLPIPDHLEGLEPDN
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggacactctggagtcagagctgacctgcccaatctgcctggagctctttgaagacccg
ctactgctcccctgcgcccacagcctgtgctttggctgcgcccatcgcatcctcatttcc
cactgtgctaccaacgaatctgttcagagcatcggcgccttccagtgccccacctgtaga
tatgtcatttccctgagtccggagcgtggactagaaggacttaagaggaacgtgaccttg
cagaacattattgatagagttcagcgggcatcatcttcagctggggtgcctctcccgctg
ccgttgcctgcgccccacagcgggcccaactctcccggagacgaagggagcaaccggttg
gctctggtcccagtcagtgctgccatgtcgagcccaggcacccctcctgagccggtccag
tgccagttctgtgagcaggacccaccgcaggatgccgtcaaaacgtgtgtgacgtgtgag
gtgtcgtactgcgaggagtgcctcagagcgacgcacccaaacaagaagccgtttactggc
cataggctcatagagcccatgccagactcccacctcagagggctccagtgcctcgagcat
gaggaggagaaggtcaacatgtactgtgtcactgatgatcagctcatctgctcgctgtgc
aaactggttgggaggcacagagaccaccaggtagcagcactgagcgaccgctttgaaaaa
cttaggcaagccctggataccaacctgagcaatctgataaagaggaacaacgagctggag
tctcttatggggaaactgatccagacttgtcaacatgtagaggtgaacgcgtcccgccag
gagggcaagctgctggaggagtgtgatgtcctgattgacattattcagcagcggaggcag
atcattggcaacaagatcaaggaggggaaggcacaaaggattcggaagctcgcccaacag
atctcaaactgcaagcagtgcatcgagaggtccaccgctctcatcacgcaagctgatcaa
acactgaaagaaaccgatcatgctcgcttcctgcaaactgccaagagcatcaacgagagg
gtttctatggcgactgcatcgacccaagtgctgatccctgagatacacctaacagacacc
tttgactctgttgccctggacttcaccagagagaagaagttgctggagaatctggattac
cttacagctccgagtgctccgtgcataagggaagagttgtgtacggcttcctacgacacc
atttctgtccactggacgtctgatgatgagttcacagtggtgtcctatgagctccagtac
gccatcttcactggacagtctaacattgccagtctgtgtaactcattggagagctggatg
attgttcccaacatcaagcagaaccactacacagtgcacggtctgcagagtggcaccaag
tatatctttgttgtcaaggccattaaccaagcgggaagcagaagcagtgaaccggggact
ctgaagaccaacagccagccattcaagctggaccccaagtctgcccacaagaagctgaag
gtgtcccacgataacctgacagtggaacgggatgaaaccacatccaagaaaggccacagc
caggagcgtttctccagccagaacagctacggcgtggtggggaatgtctacatcgacagc
ggccgtcactactgggaggctttaattggagggagcacatggtacgctgtgggtatagcc
tacaaatcagcccccaagcacgagtggatcggcaagaactcagcctcctgggtgctctgc
cgctgcaacaactcctgggtggttcgccacaacagcaaagagctggctatcgagccctcg
ccccacctgcgacgtgtcggggtcctgttggactacgatgccgggtacgtgaccttctac
gatgctgtgggctcccagcacttgcacacattccatgtgtctttcgtccagcctgtgtgt
cctgtgttcaacgtgtggaataagtgtttgacgattctcactggtctacccatccctgac
cacctagagggactggagcccgacaactga
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