Plectropomus leopardus (leopard coralgrouper): 121963906
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Entry
121963906 CDS
T07454
Symbol
fxr1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121963906 (fxr1)
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121963906 (fxr1)
Factors involved in mRNA localization
Other mRNA localization factors
121963906 (fxr1)
mRNA cycle factors
Stress granule specific factors
121963906 (fxr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
FXR_C1
Tudor_FRX1
KH_1
Agenet
FXR_C3
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-GeneID:
121963906
NCBI-ProteinID:
XP_042370076
LinkDB
All DBs
Position
3:9207496..9219672
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AA seq
735 aa
AA seq
DB search
MEELAVEVRGSNGAYYKGFVKDIHDDSLTIAFENNWQPERQVPFSDVRLPPPADAKKEMG
EGDEVEILSRANEQEPCGWWLAKVRMMKGSFYVIEYAACDATYNEIVTFERLRPVNPNKA
ITKNSFHKCTVPVPQDLQEACQNENAHKDFKKAVGACRISYCPETSQLLIVSTNESTVKR
VSLLSDMHLRSIRTKLLLMSRNHEATKHLESSRQLVSSFQEEFTVRTDLMGLAIGSHGSN
IQQARKVPGVSAIDLDEETGTFRIYGETAEAVKKARNYLEFLEDSVQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNDNKQPRQEVSLLLVFTATDETACRASFCVIYTNNVDTL
FLLHSLSPILTCVLCFFVLLTQGMVPFTFVGTKESIGNVQVLLEYHISYLNEVEQLRLER
MQIDEQLRQITQGHRPGDRERGERGGGYNADGSANASSSSLHGSRSYNGRGRGRRGHGYS
TGYGTNSEQSNASETDSERRDELSDWSLAAEDQDNRERERGSRPQRDGRRRPGPGRGRGG
PGGRGRGGRGGYSNSSAGHQYHEDNHGYGAAETNTETDQTADTDASESNLPANRRRRSRR
RRTDEDTTLMDGMSESDNASMSENGIDDSEAKPQRRNRSRRRRVRLPEERQPVTVADYIS
RAESQSRQMTATKDNKKNKDVGQVDAIAEDSPPSAPATTNGSKDAASEGSNATGDVAKVS
YQGDSNPQPVVNGLS
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggaagaactggcggtggaggtccgtggctccaacggggcttattataagggctttgtc
aaagatatccacgatgactctctcaccattgcctttgagaacaattggcagccagagcgc
caggtgccctttagtgatgtcaggttgccaccgcccgctgacgccaagaaggagatggga
gagggcgatgaggtggagatcctctccagagctaatgagcaggagccttgtggttggtgg
ctggctaaagtccgcatgatgaagggatctttctatgtgatagagtatgcagcctgcgac
gctacctacaatgagatagtgacctttgagcgtctgcgtcctgtcaaccctaacaaggcc
atcaccaagaactcctttcacaagtgcactgtccctgttcctcaggatctacaagaagcg
tgccagaatgagaatgcccataaggactttaagaaagctgttggagcctgtcgcatctca
tactgccctgagaccagccaactactgattgtgtccaccaatgagtcgacagtgaagcgt
gtgtccttgctgagtgacatgcacctgcgcagcatcaggaccaagctgctcttaatgtca
cgcaaccatgaggccacaaaacacctggagagctccaggcagctggtgtcgtccttccag
gaggagttcactgtgagaacggatctgatgggcctggccatcggcagtcatggcagcaac
atccagcaagcacggaaagttccaggtgtctctgccattgacctggatgaggagactggc
actttcaggatttatggagagacagcagaggcagtgaagaaggccaggaactacctggag
tttctggaggactctgtccaggtgcccaggaaccttgttggcaaagtgattggtaagaat
ggtaaggtcatccaggagattgtggacaagtctggtgtggtgagggtcaggatagaagga
gacaatgacaacaagcagccccgacaggaagtaagcctgctactcgtctttaccgctact
gatgaaactgcttgtagagcatcattttgtgttatctatacaaataatgtggacacgctc
tttcttcttcactcactcagtcccatactaacatgtgtgttgtgtttttttgttttgttg
acacagggaatggtcccatttacctttgtcggtactaaggagagtattggcaatgttcag
gtgttgctggagtaccacatctcttacctcaatgaggttgagcagcttcgtctggagagg
atgcagattgatgagcagttacgtcagatcacccagggccaccgcccgggtgacagagag
agaggggaaagaggaggagggtataatgcagatggcagtgccaatgcttcctcgtcttct
ttacacggcagtcgctcctacaacggtcgagggcgtgggcgcagaggccacggctacagc
actggatatggcaccaactcagagcagtccaacgcctctgagactgattcagagcgcagg
gatgagctcagtgactggtctcttgctgcagaggaccaggacaacagggagagggagaga
ggctccagaccacaaagagatggccgtaggaggcctggacctggtcgaggcagaggaggg
cctggaggacgtgggagaggaggaagaggaggatacagcaacagctctgcagggcatcag
taccatgaggataatcatggctacggagccgcagagacaaacactgagactgaccagaca
gctgatacagatgccagcgagtccaacttgcctgcaaaccgccgcagaagatctcggcgg
cgcaggacagacgaggacaccacactgatggatggcatgagcgagtcagacaacgcttca
atgagtgaaaatggaatagatgactcagaagctaaacctcagcgccgtaaccgtagtcgg
cgtcgccgtgtccgcctgcctgaggagaggcagccagtgacggtggctgactacatatcc
cgggctgaatctcagagcagacagatgaccgccaccaaggacaacaagaaaaacaaggat
gtgggtcaggtggatgccattgcagaggacagcccaccgtctgccccggcaaccaccaat
ggttctaaagatgctgccagtgagggcagcaacgccaccggagatgtcgccaaagtctcc
taccagggggactctaacccgcaaccagtggtaaacggactctcttag
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