Plectropomus leopardus (leopard coralgrouper): 121964091
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Entry
121964091 CDS
T07454
Name
(RefSeq) nucleoporin 88-like
KO
K14318
nuclear pore complex protein Nup88
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121964091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121964091
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121964091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
HTH_32
PqqD
Fib_alpha
CAP_N
Motif
Other DBs
NCBI-GeneID:
121964091
NCBI-ProteinID:
XP_042370249
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MAAFGTERWLNDLPNHNIFQKIRDKLDTETTTNEKGIAKNLTFCLGGDLFVWDDTDRVFY
TTNLRQLNTDESSGKYQTLLCINPPLFELNQVLLSPTQHHVALIGQRGVSVLELPQRWGK
RSEFEGGRSEINCRTIPVAERFFTSSPSVSLRQAAWYPSETDEPHLVLLTSDNTIRFYGL
KLPQTPAKVLSLSQSEDDSSSHPPVRSYAASLGEIAVAFDFGPISPPLRHLAAQRSKEQL
VYPLYILYENGETYVSYTSQANGVSVTKPVGPLPMYPAAEDNYGYDACAILCLPCVPSIL
VIATETGTLYHCVVLESEEEEEAVEKWTTEAVPALYVFECVELELTLKVATGEDEEPQDF
DFTCPIRLHRDPLCQHRYHCTHEAGVHSVGLIWVNKLQKFLQSGEEDKDSIQELAAEKRC
IVEHILCTRPLHTSQSAPVRGFLIVSDLSLGATMICITSTYECILLPLLSSIRPPSPPLL
CSHPGPGSGSSPLRGLADDSFEQHIRNILARSSTNPLVLKAGDKDTSPPPSECLQLLSRA
TQVFSEEYILKQDMAREEMQRRVKLLTGQKNKQLEEMTLCREERKSLREAAERLADKYED
AKYRQETIMSRVKKVLSSLQSQLPILSNSEKDMKKELQIISDQLKHLDNCIKQVNMKMEY
QKTQVDKDVPAARTTVSLNAHQKKVVQDVLREQGQQIGDMMKQIKDIKNHFSF
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggcggctttcggcacggagcggtggttgaatgatttaccaaaccataatattttccaa
aaaatacgagataagttggatacagaaaccactacaaatgaaaaggggatcgctaaaaat
ctcaccttttgtttgggaggggacttgttcgtgtgggacgatacggaccgcgtgttttac
acgaccaacttacgacagttaaacacggatgagagtagcgggaagtaccagaccttgctg
tgcatcaaccctcctctcttcgagttgaaccaagtgttgttaagtccaactcagcaccac
gtcgcactcatcgggcagcggggggtctcggtactggagcttcctcaaaggtggggcaag
aggtccgagtttgagggcggacggagcgaaatcaattgcaggaccatcccggtggcggag
cgcttcttcaccagctccccgtctgtgagtctacggcaggcggcttggtacccgagcgag
actgacgagccacacttggtgctgctcacttccgacaacaccatcaggttttacggcttg
aagttgccccaaactccagccaaagtcctgtcactgtcacagtctgaagatgacagcagc
agccatcctccggtccgctcctacgcagcatctcttggtgagatagcagtcgcgtttgac
tttgggccgatttcgcccccacttcgacatttggcagcacagaggtccaaagaacagctt
gtctaccctctgtacatcctctatgaaaacggggagacctatgtgagctacacgagccag
gcaaacggtgtgagtgtaactaaacctgttggacccctcccaatgtatcctgcagcagag
gataactatggttatgatgcttgtgccattctctgccttccctgtgtgcccagtatcctg
gtcatcgccacagagacaggcacgttgtatcactgtgtggtcttggagtctgaagaggag
gaagaagcagtggagaagtggaccacagaggccgtgccagctctctatgtatttgagtgt
gtagagctggagcttaccctcaaagtagccactggagaggatgaggagcctcaagatttt
gatttcacctgcccaatcagactgcacagagaccccttgtgccagcacaggtatcattgc
acccatgaagctggggtgcacagtgtggggctaatatgggtcaacaagctgcagaagttc
ctccagtctggcgaggaggataaggacagtatccaggaactggctgctgagaagcgctgt
atagtagagcacattctttgtaccagaccgctccataccagccagtcagctccagtccgt
ggctttttgattgtgtctgacctttccttgggtgccaccatgatttgcatcaccagtacc
tatgagtgcatcttgctgcccctgctgagctccatccgccctccctctcctcccctgctc
tgttcccatccaggtccaggctctggtagctcccctctgcgcgggctggctgacgactct
tttgagcagcacattcgcaacatcctggcacgcagctccaccaaccctctcgtactgaaa
gcaggagacaaggacacatcaccgccaccctctgagtgtctgcagctcctcagcagagcc
acgcaggtcttcagtgaggagtacattctcaagcaggacatggcccgtgaggagatgcag
aggagggttaaactcctgacaggtcagaagaacaagcagctggaggagatgactctgtgc
agggaggagaggaagagtctgagagaggctgcagagaggttggctgataagtacgaagat
gcaaagtatcgccaggaaaccatcatgagcagggttaaaaaagtgctgagcagccttcaa
agccaactgcccatactgtcaaacagtgaaaaggatatgaagaaggagctgcagatcatc
agcgatcaactcaaacacctggacaactgcatcaaacaggtgaacatgaagatggagtac
cagaagacgcaagtggacaaagacgtacccgcagccagaacgacagtctcactcaacgcc
caccagaagaaggttgtacaggatgtcctcagagaacagggacagcaaatcggtgacatg
atgaaacagatcaaagacatcaaaaatcatttcagtttctaa
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