Plectropomus leopardus (leopard coralgrouper): 121965093
Help
Entry
121965093 CDS
T07454
Symbol
lsm4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03018
RNA degradation
plep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121965093 (lsm4)
09123 Folding, sorting and degradation
03018 RNA degradation
121965093 (lsm4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121965093 (lsm4)
03041 Spliceosome [BR:
plep03041
]
121965093 (lsm4)
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121965093 (lsm4)
mRNA degradation factors
5'-3' decay
Lsm complex
121965093 (lsm4)
Spliceosome [BR:
plep03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
121965093 (lsm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
121965093
NCBI-ProteinID:
XP_042371198
LinkDB
All DBs
Position
3:15553309..15556878
Genome browser
AA seq
147 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGAQQNKQQGKGRGGAGRGLFGGRGRGMTG
PGRGQQQQMQQQGDKKAGKPQGMKNQH
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgcttccactatctctgctgaagactgcccagaaccatcccatgttggtggagctgaag
aatggagagacatacaacggtcacctggtcagctgtgacaactggatgaacatcaacctg
agagaagtcatctgcacatcgagggatggagataagttctggaggatgcctgagtgttac
atcagaggaagcaccatcaagtatctgcgaatcccagacgagatcattgacatggtgaag
gaggaggtggtgtcgaagggccgcggacgtggaggcgcccagcagaacaaacagcaggga
aaaggaagaggaggagccggcaggggtctgtttggcggccgtggcagaggaatgacgggt
cctggtcggggccagcagcagcagatgcagcagcagggggataagaaagcaggcaaacct
cagggaatgaagaaccagcactga
DBGET
integrated database retrieval system
