Phaethon lepturus (White-tailed tropicbird): 104613599
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Entry
104613599 CDS
T08325
Symbol
SH3RF1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
plet01009
]
104613599 (SH3RF1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plet04121
]
104613599 (SH3RF1)
Enzymes [BR:
plet01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104613599 (SH3RF1)
Protein phosphatases and associated proteins [BR:
plet01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104613599 (SH3RF1)
Ubiquitin system [BR:
plet04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104613599 (SH3RF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
Motif
Other DBs
NCBI-GeneID:
104613599
NCBI-ProteinID:
XP_010285517
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
FNTAAKQLIELDKPSGSAVDSGEGTSGAAHNNSTQKHTDTKKNTKKRHSFTSLTMSNKSS
QSSQNRHSMEISPPVLISSSNPTAAARISELTGLSCSAPSQVHIGTTGLIVTPPPSSPVT
TGPSFTFPSEVTYQAALGNMNPPLPPPPLLSAAVVASASSGPQSAGVVQRPTSGSTDQMA
HLRPQTRPSVYIAIYPYTPRKDDELELRKGEMFLVFERCQDGWFKGTSMHTSKIGVFPGN
YVAPVTRTVTSASQTKVPMSTAGQTGRVVTMVSPSTASGTSQKLQGNGVAVNSSTVPTAV
VSAAHIQTSPQTKVLMHVTGQMTVNQARNAVRTVTAHSQERPTAAVTPIQAQSPACLIPA
AVIIPHHSQQLQPQLPNTAAYITAVNANRSTIPLACAAASLNSPNIAASSLDGDISGRTV
NTHPASPESALAAGGNAAVSKVDKDGKKEKKGLLKLLSGASAKRKPRLSPPASPTLEAEQ
AAAELALQGAVGPELPSAGGHSKAGSCPTDSEVSGLAQETLHRKTSSLDSSVPIAPPPRQ
PCSSLGPVLNESRPLVCE
NT seq
1676 nt
NT seq
+upstream
nt +downstream
nt
tttaacacagcagccaaacagctgatagagttggataagccctcaggttctgctgttgac
tctggagaaggtacctctggggcagcccacaacaattcaacccaaaagcacaccgatact
aagaaaaacaccaaaaaacggcactcttttacctccctcactatgtccaacaagtcttca
cagtcttctcagaatcgccactcaatggaaattagtcctcctgtcctcatcagctccagc
aacccaactgcagcagcccgcataagtgagctgacgggactttcctgtagtgccccttct
caggttcatatcggtactacagggctaattgtgactccaccccctagcagcccagtcaca
acagggccttcatttaccttcccatcagaagttacctaccaagctgctcttggtaatatg
aatcctccacttccaccaccacctctcttgtctgctgcagtcgttgcatcggcctcttct
ggacctcagtccgcaggtgtagtacaaaggcctacatcaggatcaactgaccaaatggca
catttacgaccacagactcgtccaagtgtgtatattgctatatacccttacactcctcga
aaagatgatgaactggaactgcgtaagggagaaatgttcttagtgtttgaacgctgtcaa
gatggctggttcaagggaacttccatgcatacaagcaagattggtgtttttccgggaaat
tatgtggctccagttacaaggacagtgacaagtgcatcacaaacaaaagttcccatgtct
accgctggccaaacgggacgagtagtgactatggtcagcccttccactgctagtggaaca
tctcagaagctccaggggaatggtgtggcagtgaactcaagcacagtacccacagctgtg
gtttctgcagcacatatccaaactagtccgcaaactaaagtccttatgcacgtgacagga
caaatgacagtcaaccaggctcgcaatgcagttagaacagttactgcacacagtcaagaa
agacctacagcagcagtcacacccatacaagcacagagtccagcatgccttattcctgca
gccgtgatcattccccaccattcccagcagctccagccccagcttccaaatactgctgct
tacatcacggctgtgaatgcgaaccgctcaaccatcccactggcatgtgcagcagcttct
ttgaattctcccaacattgctgcttcatctttggacggagatattagtgggagaactgta
aacactcaccctgcatctccagagagtgctttagcagctggtggaaatgctgctgtcagt
aaagtggacaaggatggcaagaaagaaaaaaaaggtttgctgaaactgctttctggagca
tctgctaaacgcaagccccgattgtcacctccagcatcaccaacactggaggctgagcaa
gcagccgcagagttagccctgcaaggtgcagtcgggccagagcttccatcagcaggcggt
cacagcaaagctggatcctgtcccaccgacagtgaggtctctggactggcacaggagacg
ctgcatcggaaaacaagttccctggattcctctgttccgatagcaccgccgcctcggcag
ccttgctcatccctgggtccagttctgaatgaatccaggccccttgtctgtgaaag
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