Phaethon lepturus (White-tailed tropicbird): 104613889
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Entry
104613889 CDS
T08325
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet03022
Basal transcription factors
plet03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104613889
09124 Replication and repair
03420 Nucleotide excision repair
104613889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plet03021
]
104613889
03400 DNA repair and recombination proteins [BR:
plet03400
]
104613889
Transcription machinery [BR:
plet03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104613889
DNA repair and recombination proteins [BR:
plet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104613889
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
104613889
NCBI-ProteinID:
XP_010290758
LinkDB
All DBs
Position
Unknown
AA seq
292 aa
AA seq
DB search
IGLIVTKNKRAEKMTELSGNAKKHINALKKAVDMNCSGEPSLYNSLNLAMQTLKHMPGHT
SREVLVVFSSLTTCDPANIYDQIKRLKAVKIRVSVIGLSAEVRVCTVLARETGGTYHVIL
DESHYKELLMHHVSPPPASSNSECSLIRMGFPQHTIASLSDQDAKPSFSMAQLENNNEPG
LTLGGYFCPQCRAKYCELPVECKICGLTLVSAPHLARSYHHLFPLDAFQEVPLEEYQGER
YCQACQGEMKDQNVYICKVCQNAFCVDCDLFVHDSLHCCPGCMHEQPAPLSV
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
attggcttaattgtaaccaagaataaaagagctgaaaaaatgacagaactttcaggtaac
gcaaaaaagcacataaatgctctgaagaaagcagtggatatgaactgcagtggagagcca
tctctgtataattccctgaacttggccatgcagactttaaagcacatgccaggacataca
agcagagaggttttggtagtcttcagcagtctgacaacatgtgatccagccaacatctat
gatcaaattaagcgtttaaaagcagttaagatcagagtatctgtcatcggcctcagtgct
gaagttcgagtttgtacagtacttgcccgagaaactggtggaacataccacgttatttta
gatgaaagccattataaggaactgctgatgcatcatgttagtcctccacctgccagttca
aattctgagtgctcccttattcgaatgggttttcctcagcatactattgcttctctatct
gatcaagatgcaaagccatcctttagcatggcgcaattggaaaacaacaatgagccgggt
cttacactgggtggatatttctgtccccagtgcagagccaaatactgtgaacttccagtg
gaatgcaaaatctgtggtcttacattagtgtctgcacctcacctggctcggtcttaccat
cacttgtttcctttggatgcctttcaggaagttcccctggaagaatatcagggggaacgg
tattgtcaagcttgccagggagaaatgaaagatcaaaatgtttacatatgtaaagtgtgt
cagaatgcattttgtgtggactgcgatttgtttgttcatgattctctgcactgctgtcct
ggctgtatgcacgagcaacctgctcccttatctgtatga
DBGET
integrated database retrieval system
