Phaethon lepturus (White-tailed tropicbird): 104614121
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Entry
104614121 CDS
T08325
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plet03009
]
104614121 (DDX55)
Enzymes [BR:
plet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104614121 (DDX55)
Ribosome biogenesis [BR:
plet03009
]
Eukaryotic type
Pre-60S particles
Helicases
104614121 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
SBF_like
SHOCT
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104614121
NCBI-ProteinID:
XP_010289591
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MTPVQSATIPLFMNNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKMQVGAVIITPT
RELAIQIDEVLSHFTKHFPTFSQILLIGGRNPMEDVEKFKEHGGNIIVATPGRLEDLFRR
KADGLDLASCVKSLDVLVLDEADRLLDMGFEASLNTILDFLPKQRRTGLFSATQTQEVEN
LVRAGLRNPVRISVKEKGVAANNTQKTPTRLENYYMICKADEKFNQLVHFLRQHKQEKHL
VFFSTCACVEYYGKALESLIKQVKIMSIHGKMKHKRNKIFTEFRKLPGGILVCTDVMARG
IDIPEVHWVLQYDPPSSASAFVHRCGRTARIGNVGSALVFLLPMEESYITFLSINQKCPM
QEMKPQTNVLDLLPKLKSMALADRAVFEKGMKAFVSYVQAYAKHECNLIFRIKDLDFASL
AKGFALLKMPKMPELRGKCFPDFTPVTVDTDSISFKDKNREKQRQKQLEQQRKERQENGG
KKKFIKNKAWSKQKAKREKKKKVTAKRKHEEGSDIEDEDMEELLNDTRLLKRLKKGKISE
EEFEKRLTGSQSRLKAEAVADLGV
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaccccggtgcagtctgcgaccattccactgttcatgaacaacaaagatgttgctgca
gaagcagtaacaggcagtggcaaaaccttagcatttgtaattcccatcctggaaattctc
ctcagacgggaagaaaaattaaagaaaatgcaggttggagctgtaattatcacaccaaca
agagaattagctattcaaattgacgaagtgctatcgcatttcacaaaacacttccccacg
tttagtcagattcttttaattggtggtaggaatcccatggaagatgttgaaaagtttaaa
gaacacggtggaaacatcattgtagctacaccaggccgcttggaggatctattcagaaga
aaagcagatgggctggatctagcaagttgtgtgaagtctcttgatgtgttggtattagat
gaagcagacagacttctagatatgggctttgaagcaagtttaaacaccattctggacttt
ttgcccaagcagagacggacaggtctgttctcagcaactcaaactcaagaggtggagaat
ctggtgagagcaggtctcaggaatcccgtccgcatctcagtgaaagagaagggagtggca
gcaaacaacacacagaaaactccaacacgcctggagaactattatatgatctgcaaagca
gatgaaaaattcaatcagttggtacattttcttcgtcagcacaaacaggaaaaacatcta
gtctttttcagcacgtgtgcctgtgtggaatactatgggaaggctttggaatccttaatt
aaacaagtgaaaataatgagtattcatgggaaaatgaaacacaagcgtaacaagattttt
actgagtttcggaagctcccaggtggcattttagtttgcactgatgtgatggctcgtggc
atagacattccagaagtacactgggttttacagtatgacccacctagcagtgcgagtgcc
tttgtgcatcggtgtggtcgaacagcacggatcggcaatgtaggcagtgcacttgtattt
ttgcttcccatggaagaatcttacattacctttctctcaatcaaccaaaagtgtcctatg
caggaaatgaaaccacagacaaatgtgttagatcttcttccaaaactgaagtctatggcc
ctagctgacagggcagtgtttgagaaagggatgaaagcatttgtgtcttatgtccaggcc
tatgccaagcatgaatgtaatctgatcttccgaataaaagatctggattttgctagcctt
gccaaaggttttgcattgttaaaaatgccaaagatgcctgaactaagaggaaaatgtttt
ccagactttactccagtcactgttgatacagactccatttcatttaaggataaaaataga
gaaaaacagagacaaaagcaattagaacaacaaagaaaagaaagacaggaaaatggaggg
aaaaagaaatttataaagaacaaagcctggtcaaagcagaaagccaagagggagaagaaa
aagaaagtaacagctaaaaggaagcatgaagagggctctgatattgaagatgaggatatg
gaagagctgctgaatgacacaagactcttgaaaagattaaaaaaaggaaaaattagtgaa
gaagagtttgagaagagactaacaggcagccagagtagactcaaagcagaagctgttgct
gacttaggagtctga
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