Phaethon lepturus (White-tailed tropicbird): 104614135
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Entry
104614135 CDS
T08325
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104614135 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plet03400
]
104614135 (MSH2)
DNA repair and recombination proteins [BR:
plet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104614135 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
104614135
NCBI-ProteinID:
XP_010295501
LinkDB
All DBs
Position
Unknown
AA seq
862 aa
AA seq
DB search
TQKLESVVLSKMNFESFVRDLLLVRHYRVEVYKNKAGSKSIKENDWYLAYKGSPGNLSQF
EEVLFANNDMSSAIGVVGVKLSTTDGQRVVGVGYVDTTLRKLSVCEFPDNDQFSNLEALL
VQLGPKECVLPGGETAGEMAKLRQVIQRGGILITDRKKADFTTKDIVQDLNRLLKSKKEE
QMNSAALPEMEKQVAVSSLSAIIKFLELLSDESNFGQFELTTFDLSQYMILDNAAVQALN
LFQSSVENANTAQSLAGLLNKCRTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVVDPE
LRQCLQEDLLRRFPDLNRLAKRFQKQAANLQDCYRMYQAINQLPNVVQALQKHEGAHQML
LLAVFITPLNDIYSDFSKFLEMIETTLDMDKVENHEFLVKASFDPNLTELREKMNELEEK
MQSFLKSAAKELGLEAGKSIKLETNSQFGHHFRITCKEEKVLRNNSKYGIVDTQKNGVKF
TNSKLSSVNDEYIKNREEYEEAQDAIVKEIINIASGYAEPIQTMNDVIAHLDAIVSFAHV
SNGAPVPYVRPVIRENGQGRIVLKGARHPCIEVQDEVAFIPNDITFEKGKQMFHIITGPN
MGGKSTYIRQTGVIVLMAQIGCFVPCDSAEITIVDCILARVGAGDSQLKGVSTFMAEMLE
TASILRTASENSLIIIDELGRGTSTYDGFGLAWAISEYIASKICAFCMFATHFHELTALA
DQVPTVNNLHVTALTSNDTLTMLYRVKEGVCDQSFGIHVAELAAFPKHVIESAREKALEL
EEFQNIGKSKESGGEPPAKKSCLEGEEGEKIIQDFLCQVKALPLTDMSEEDIKVKLKQLR
NDVLAKNNSFVNEIISRTKVTS
NT seq
2591 nt
NT seq
+upstream
nt +downstream
nt
gaactcagaagcttgagagtgttgtgcttagtaaaatgaacttcgaatcttttgtgagag
atctgcttttggttcgtcattacagagttgaagtttacaagaacaaagcaggcagtaaat
ctatcaaagaaaatgactggtatttagcgtacaagggttctccaggaaatctttcccagt
ttgaggaagttctctttgccaacaatgatatgtcatcggccattggggttgtgggggtta
agctgtctactactgacggacaaagagtagtaggagttgggtatgtcgacactacactga
gaaaattgagtgtctgtgagtttccagataatgatcagttctcaaaccttgaagctctgc
tggttcaactaggaccaaaggagtgtgtgctaccaggaggagagactgcaggagagatgg
caaaactacgacaagtcattcagaggggaggaatcctgattacagacaggaagaaggcgg
atttcacgacaaaagatattgttcaggatctcaatcgcttgttaaaatcaaaaaaagaag
aacaaatgaatagtgcagcattgccagagatggaaaagcaggttgctgtttcgtctttgt
cagccattatcaagtttttagagttgctgtcagatgagtctaactttggacaatttgaac
tgactacttttgatcttagtcaatatatgattctagataatgcagctgttcaagctctca
acctttttcagagttccgtggaaaatgctaatactgcacagtctctagctggtttgctaa
ataaatgcagaacccctcaaggacaaagactagttaatcagtggatcaaacaaccactta
tggacaagaatagaattgaagaaagattgaatttggttgaagcttttgtggtggatccag
aactacgtcagtgccttcaagaagatctcttacgtcgcttcccagatcttaaccggctgg
caaagagatttcagaaacaagcagcaaacttacaggactgttaccgaatgtatcaggcta
ttaatcagctgcctaatgttgtacaagcactacaaaaacatgaaggagctcaccagatgt
tgttgttggcagtgtttataacacctcttaatgatatctactctgacttctcaaagtttc
tggagatgatagaaacaacattggacatggataaggtagagaatcatgaatttcttgtca
aggcttcttttgatcctaatttgacagaattaagagagaagatgaatgaactggaagaaa
aaatgcagtcctttttaaagagtgcagccaaagaactaggtttggaagctggcaaaagta
tcaaactggagacaaattcacaatttggacatcactttcgaataacttgcaaggaggaaa
aagttctccgtaacaattcaaaatatggaatagttgatacccagaagaatggtgtgaaat
ttactaacagcaaactgagctctgtcaatgatgaatacataaagaacagagaagagtatg
aagaggctcaggatgcaattgttaaggaaatcattaacattgcttcaggttatgcagaac
caatacagacgatgaatgatgtgatagctcatttagatgcaattgtcagttttgctcatg
tgtcaaatggagcaccagtgccatatgtccgtcctgtcattcgggaaaacggacaaggaa
ggattgtactgaaaggtgccaggcatccttgcatcgaagtgcaagatgaggtggccttca
tccccaatgacattacatttgagaagggcaagcagatgttccacattattactggcccta
acatggggggaaaatcaacctacatccgacagacaggagtgattgttcttatggcccaaa
ttgggtgttttgtaccatgcgactctgcagaaataaccattgtggattgtatcctggctc
gggtgggagctggagacagtcagctgaaaggggtgtctactttcatggctgaaatgttag
aaacggcttcaatccttaggactgcatctgaaaactccctgataatcattgatgagctgg
gaagaggaacttctacctacgatggctttggcttagcatgggctatttcagaatacattg
ctagcaaaatctgtgctttctgtatgtttgctacacatttccatgaactgacagctcttg
ctgaccaagtgccaacagtaaataacctacatgttactgctctgacgagtaatgacactc
tgacgatgctttatcgtgtcaaggaaggtgtgtgtgaccagagttttggaatacatgtag
cagagttggcagctttcccaaaacacgtgatagaaagtgcaagagagaaagcattggagc
tggaggagtttcaaaacattggcaagtccaaggaatctggaggagaaccaccagccaaga
aatcatgtttagagggagaagaaggtgaaaagataattcaggattttctttgtcaagtga
aagcattgcccctgacggatatgtcagaagaagacatcaaagtcaagctgaaacagctga
gaaacgatgtattggcaaagaacaacagttttgtgaatgaaatcatttcccgaacaaaag
ttacatcatga
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