Phaethon lepturus (White-tailed tropicbird): 104614178
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Entry
104614178 CDS
T08325
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104614178 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plet03021
]
104614178 (SMARCD1)
03036 Chromosome and associated proteins [BR:
plet03036
]
104614178 (SMARCD1)
Transcription machinery [BR:
plet03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104614178 (SMARCD1)
Chromosome and associated proteins [BR:
plet03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104614178 (SMARCD1)
PBAF complex
104614178 (SMARCD1)
GBAF(ncBAF) complex
104614178 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
104614178
NCBI-ProteinID:
XP_010283770
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
PQQLQQVQPQAVPNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRK
RLDIQEALKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKY
DATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTV
LLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREYVICDKYLQ
QIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQM
NSFLLSTASQQEIAALDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLK
TMTDVVGNPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
ccgcagcagctccagcaggtgcagccgcaggctgtgcccaaccgcaaccacaacgctaaa
aagaagaagatggctgacaaaattctacctcagaggattcgtgaacttgtccccgagtcc
caagcctatatggacttgctggcctttgaaaggaaattggaccagacgatcatgaggaaa
cgcctggatatccaggaggctttgaagcgacccattaagcaaaaacgaaagctacgtatt
tttatctccaataccttcaatccagccaagtcggatgcagaggatggtgaaggaaccgtt
gcctcctgggagcttcgggtggaaggtcgactgctggaagattctgctttgtccaaatat
gatgccaccaagcagaaaagaaagttctcatccttctttaaatctctggtcattgaactt
gataaagacctgtatggccctgacaatcacctggtagagtggcacaggactgctacaact
caggagacagatggcttccaggtgaagaggccgggagatgttaatgtgcgctgtactgtc
cttctgatgctggattaccagcctccccagttcaaactggatccccgcttggctcgtctc
ttggggattcacactcagacccgtccagtgatcatccaggcattgtggcaatatatcaag
actcacaagctccaggacccccacgagcgggagtatgtcatctgtgacaaatacctccag
cagatatttgaatctcagcggatgaagttctctgaaatcccgcaaagacttcatgcgttg
cttatgcccccagaaccgatcatcattaatcatgtgatcagtgttgacccaaatgaccag
aagaaaactgcttgctatgacattgatgtggaggtggatgataccctgaaaactcagatg
aattcctttctgctatccacagccagtcaacaggaaattgctgctctggataacaagatt
catgaaacaatagagacaattaaccagctgaagacccagcgcgagttcatgctgagcttt
gcccgagatcctcagggcttcatcaacgactggctacagtcccagtgccgggatttaaag
acaatgactgatgttgtcgggaatcctgaagaggagcgtagagctgagttctacttccag
ccgtgggctcaggaagccgtgtgcagatacttctactccaaggtgcagcaaagacggcag
gagttggagcaggccctgggaatccgcaacacatag
DBGET
integrated database retrieval system
