Phaethon lepturus (White-tailed tropicbird): 104614550
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Entry
104614550 CDS
T08325
Symbol
HERC4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104614550 (HERC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plet04121
]
104614550 (HERC4)
Enzymes [BR:
plet01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
104614550 (HERC4)
Ubiquitin system [BR:
plet04121
]
Ubiquitin ligases (E3)
HECT type E3
104614550 (HERC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
104614550
NCBI-ProteinID:
XP_010292708
LinkDB
All DBs
Position
Unknown
AA seq
1056 aa
AA seq
DB search
MLCWGNASFGQLGLGGIDEEVVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGC
NDLGQLGHEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPG
TEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQSS
PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLR
TQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSVVTQIT
CGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGNWLPYSAQCPMTPGSEE
CYCVKRIFSGGDQSFAHYFYPQNMVPPDDFRYPDFLKQIWTVNENFIQRLLTFPSGRLPV
EIANEIDGTFSSAGCLNGSFLALSNDDHYKTSTRFSGVDMNAARLLFHKLIQPDHSHISQ
QVAASLEKNLIPKLTSSLPDVEALRLYLTLPECPLMSDVNNFTTLAIPFGTAILNLEKAP
LKVLENWWSALEPPLFLKIVELYKDVVVHLLKLCKIGIPASERRILTNFLHTAFRVLEIL
HRVNERGQVIQYDRFYIHEIQDLIDIRNDYVNWVQQQVFGMDVNHGLTELTDIPVTICTY
PFVFDAQAKTTLLQTDAVIQMQMAVDQAHRQNLSSLFLPVFESVNPCLILMVRRDNIVGD
AVEVLRKTKNVDYKKPLKVIFVGEEAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEESRL
IWFSDKTFEDSDLFHLIGVVCGLAIYNFTIVDLHFPLALYKKLLNKKPSLDDLKELMPDV
GRGMQQLLDYPEDDIEEAFCLNFTITVENFGTTEIKELVPNGADIPVVKQNRQDFVDAYV
DYIFNKSVASLFSAFHAGFHKVCGGKVLQLFQPSELQAMVIGNTNYDWKELEKNTEYKGE
YWADHPTIKIFWEVFHELSLEKKKQFLLFLTGSDRIPILGMKCLKLVIQPTGGGEGYLPV
AHTCFNLLDLPKYTDKETLKSKLIQAIDHYEGFSLV
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgctggggaaatgcatcctttggacagcttggattgggtggaattgatgaagag
gttgttttagaacccagaaaaagtgactttttcttaaataaaaggatcagagatgtaggg
tgtggactgagacatactgtttttgtcttggatgatggaactgtttatacatgtggatgc
aatgatttaggacaactagggcatgaaaaagccaggaaaagacccgagcacgttggtgca
ctggatgcccaaaatattgtagctgtatcctgtggagaagcccacactcttgcattaaat
gacaagggtcaggtatatgcatggggtctggctactgatggacagcttggcttgccggga
acagaggaatgcatcagagtgcccagaaatattaaaagcttatcagagatccagattgtt
caagttgcttgtggttattatcactcgctagcactctcaaaaggaagtgaagtgttttcc
tggggacaaaataaatatggccagctgggcctaggttacgagtataaaaaacaaagctca
ccacatgtgattaaatctctgctgggaatcccttttgcacagattgcagcaggaggagct
catagttttgtactaactctttctggagccatttttggatggggacgcaacaaatttggg
cagctgggtcttaatgatgataatgacaggtatgttcctacgctgctaaagtccctgaga
actcagaaggttgttcatatatgttgtggagaagatcatactgctgcccttacaaaggaa
ggtggggtttttacatttggagctggaggctatggtcagttgggtcataactctaccagc
catgagataaacccaaggaaagtttttgaacttatgggaagtgttgtcacgcaaatcact
tgtggcaggcagcacactactgcgtttgttccttcatctggaagaatttattcttttgga
ctcggaggtaacgggcaattaggtacaggaacaaccagtaataggaaaagtcccttcaca
gtaaaaggcaactggcttccttacagtgctcaatgcccaatgaccccaggcagtgaggag
tgttattgtgtaaagagaattttctctggtggggaccaaagttttgcacactacttttat
ccacagaacatggtgccaccagatgattttaggtatcctgactttttgaagcagatctgg
actgtgaatgaaaactttattcaaagattgttgactttcccatctggaagacttcctgta
gagatagctaatgaaattgatggaacattctcctcagctggatgcctgaatgggagcttt
ttggctttgagcaatgatgatcattacaaaaccagcactagattctcaggggttgatatg
aatgctgctagactactgtttcacaaacttatacagcctgaccacagtcatatatcacaa
caggtggcagctagtttggaaaagaaccttattcccaaattgaccagctccttaccagat
gttgaagctttgaggctgtatctcactctacctgaatgcccgctgatgagtgatgtaaac
aatttcacaacgttagctattccttttggaacagccattctgaacctagagaaagctcct
ctgaaagttcttgaaaattggtggtctgcacttgaacctccgttgttcctcaagatagtg
gaactctacaaggatgttgtagtccacctcttgaagttgtgcaagattggcattccggct
tctgaaagaagaatacttaccaattttctacacacagctttcagagttctggaaatattg
catagagtaaatgaaagaggacaagttatacagtatgacagattttacattcatgagata
caagacttgatagatatcagaaatgactatgtcaactgggtccagcagcaggtatttgga
atggatgtcaaccatggattaactgagttaacagatattcctgttacaatttgcacatac
ccatttgtatttgatgcccaggcaaagacaactctcctacaaacagatgcagtcatacag
atgcagatggctgttgatcaggctcacagacagaatttatcttctctgtttctgccggta
tttgaatctgtcaacccatgcctgatattaatggtacggagagacaatattgtaggagat
gctgtggaagtactaaggaaaacaaagaatgtagactacaagaagcctctcaaggttatt
tttgtaggggaagaagctgttgatgctggaggtgttcgcaaagaattttttttgctgatc
atgagggagttgctagatcccaaatatggaatgttcaggtattatgaagagtccaggctg
atctggttctctgataagacctttgaagacagtgacttgtttcatttgattggtgttgtc
tgtgggctagcaatatataattttactattgtagaccttcatttccctttggctttgtac
aaaaagctattgaataagaaaccatccctggatgacctaaaagagttgatgccagatgtt
ggcaggggaatgcaacagttactggactatccagaagatgacatagaagaagcgttttgt
cttaattttactatcactgtggaaaatttcggtacaacagaaattaaagagcttgttcct
aatggtgctgacattcctgtagtcaaacaaaataggcaagattttgtagatgcatatgtg
gattacatcttcaataaatctgtggcttccttattcagtgcattccatgcaggcttccac
aaagtatgtggaggtaaagttcttcagctcttccagcccagtgagttgcaggcaatggtg
attgggaacacaaattatgattggaaggaattggagaagaatacagaatacaaaggagaa
tactgggcagaccatcctacaattaaaatattctgggaggtttttcatgagttgtctttg
gaaaagaaaaagcagtttttgctgtttctgacaggcagtgatcgtattccaattcttgga
atgaagtgtcttaaactagtcatccaaccaacaggaggtggagaagggtatcttccggta
gctcacacttgctttaatcttcttgatcttccaaaatacacagataaagaaaccctaaaa
tctaagttgatccaggctatagatcactacgaaggtttcagtttagtataa
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