Phaethon lepturus (White-tailed tropicbird): 104615094
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Entry
104615094 CDS
T08325
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plet03016
]
104615094 (TRUB1)
Enzymes [BR:
plet01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
104615094 (TRUB1)
Transfer RNA biogenesis [BR:
plet03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
104615094 (TRUB1)
Prokaryotic type
104615094 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
DMA
Motif
Other DBs
NCBI-GeneID:
104615094
NCBI-ProteinID:
XP_010289753
LinkDB
All DBs
Position
Unknown
AA seq
188 aa
AA seq
DB search
KYTAIGLLGKATDTLDATGKVTEEKPYDQVTKGDLENVLQKFTGDIMQVPPLYSALKKDG
ERLSTLMKRGEAVEAKPARPVRVYSLSLQQFQPPLFTLDVECGGGFYVRSLVSDIGKELS
TCATMQELTRTKHGPFTLEEHALYEDKWTIDEIARSLEHCTSLLPGEPSHKKLKTEHHGE
TAMSCEDK
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
aagtacactgctattggactactgggcaaagctactgatacactagacgctacgggaaaa
gtaactgaagaaaaaccttatgaccaggtaacaaaaggagatcttgaaaatgtgctgcaa
aagttcacaggggacataatgcaagttcctccactctattctgctttgaagaaggatgga
gaaaggctatcaactctgatgaagagaggagaagcagtcgaagcaaagcctgctcggcca
gtaagagtgtacagcctctctctccaacagttccagccaccactgttcacactggatgtt
gaatgtggtggtggcttctatgtcaggagcctggtcagtgacattggcaaagaactctct
acctgtgccactatgcaagagctgacccgaaccaaacacgggccatttacgctagaggag
catgccctttatgaagacaaatggacaattgatgaaattgcacgatccttagagcattgc
acgtctcttctcccaggagagccatctcataaaaaattgaagacagagcatcatggtgaa
actgctatgagctgtgaagataagtga
DBGET
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