Phaethon lepturus (White-tailed tropicbird): 104615143
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Entry
104615143 CDS
T08325
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
104615143 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plet04131
]
104615143 (RABGEF1)
Membrane trafficking [BR:
plet04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
104615143 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
104615143 (RABGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
104615143
NCBI-ProteinID:
XP_010282026
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MNLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAER
LQREEEEAYASSQSTQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFIASSRTGAKKVAQEK
IVKQGQLGRERNADNILRDLKEIFTPSWELASPTEVLAGKLKEIQEAKAPSPSINRQASI
ETDRVSKEFIEFLKTYHKPGQDIYKQCKLFLDTMNHKRDLSIEEQSECAQDFYQNVAEKL
QTRWKVPPEKVEKAMDQIEKYIMTRQYKYVFCPETTDDEKKDLAVQKRIRALHWVTPQML
CVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAIKITKNEPASAD
DFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQS
LNLSQEDFDRFMTGQTSPKKQESDSFSPDVCLGVKQMYKNLDLLSQLNERQERIVNEAKK
LEKDLIDWTDGITKEVQDIVEKYPLEIKPKNQALAAIDSENVENDKLPPPLQPQVYAG
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgaaatctgaacgcagaggaattcacgttgatcaatcagagctcctgtgcaag
aagggatgtggttactatggcaatcctgcttggcaggggttttgctccaagtgctggaga
gaggaataccataaggccaggcagaaacagattcaagaggactgggagctggcagagcgg
cttcagcgtgaggaggaagaagcgtatgccagtagtcagagtacccaaggggcacagtca
ctgaccttttcaaaatttgaagagaagaaaaccaatgagaaaacacgaaaggtcactact
gtgaagaagttcttcattgcttcttccagaacaggcgctaagaaggtggctcaagagaaa
atcgttaagcaaggacagcttgggagggagcgaaatgctgataacattctcagggatttg
aaggagatatttactccctcctgggaactggcttcccctactgaagtgttggctggcaag
ttgaaagagatccaagaagccaaggctcccagcccttctataaacaggcaggctagcatc
gagacagatcgagtatccaaggaattcatagaatttctcaagacatatcataaacctgga
caagatatctataagcaatgtaaactatttttggacacaatgaatcataaaagggactta
agtattgaggagcaatctgaatgtgcccaggacttctatcaaaatgtagcagaaaagtta
cagacacgttggaaagtgcccccagaaaaagttgagaaagcaatggatcagattgaaaaa
tacattatgactcgacagtataaatatgtcttttgccctgaaacaactgacgatgagaag
aaagatcttgctgtccaaaagagaatcagggctttgcactgggtaactccacaaatgctg
tgtgttcctgtcaatgaagaaattccagaagtctccgatatggttgtaaaagcaattaca
gatattattgaaatggattcaaagcgtgtccctcgtgataagttagcatgcatcaccaag
tgcagcaagcatatatttaatgctattaaaatcacaaaaaatgaaccagcttctgctgat
gactttcttccaacacttatatacattgttttgaagggaaacccaccccgcctgcagtct
aacatccagtatataacacgcttctgtaatccaagcaggttaatgacaggagaagacggc
tactattttaccaatctgtgctgtgctgtggccttcattgaaaaacttgatgctcagtct
ttaaatctaagccaagaagattttgatcgtttcatgactggtcagacatccccgaagaag
caagaatctgacagtttttcacctgatgtgtgcctgggtgttaagcaaatgtataaaaac
ttagacctactatctcagttgaatgagagacaggaaagaattgtcaatgaagccaagaag
cttgagaaagacctaatagattggactgatggaattacaaaggaagtccaagatattgtt
gagaaatatccattagaaataaaaccaaaaaatcaagccttagcagctattgactctgaa
aatgtggagaatgacaagctgcccccaccactgcagcctcaggtttatgcaggataa
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