Phaethon lepturus (White-tailed tropicbird): 104615220
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Entry
104615220 CDS
T08325
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2
KO
K10897
partner and localizer of BRCA2
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet03440
Homologous recombination
plet03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104615220 (PALB2)
03460 Fanconi anemia pathway
104615220 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plet03400
]
104615220 (PALB2)
DNA repair and recombination proteins [BR:
plet03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
104615220 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
104615220 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
104615220
NCBI-ProteinID:
XP_010283517
LinkDB
All DBs
Position
Unknown
AA seq
1207 aa
AA seq
DB search
SRDNISPSSDKHETSQLQTKTCSDPDTEKKTSVTFKHVPEFTSNEASLPDSSLVESIQAS
QENLCCEIIRPATEEKKPQTSSSLLKLRRRMKALVSEERESVCDVQIINTGEMVKNQSAS
IEELRSPVFRRSSLSNTEEKAQRTSRPALVGREENSFTPPDAAFRVVQDMLEDSVPPGVP
ELFPCTLKDSSDVWQPESSGAVVTSDNHEPAWLCSENSDSVLLDISGDGGKESSSIIKQT
DSESMYEDQGELRRLLDLMSENEVLPTGGNNTITNESKSHEGNQSDANGLNPFPADLSVG
NVEEQLENQQLELQSRLSDPEEVTAAESALNSCTVVEGLLFPVEYYVRTTRRMSNCQRKV
DLDAVILSQLGRSKKGQRSKCKQKDANSDRPSQERVENNLESGVTPFLFLDSENDPANSG
SPHKSLPPSSGSSTSLGSISQNSITSTKRDQRRSQRKQKGRRKSACKPPVHQVPQELVES
LDLVTMRQSSSLLSNECQSEKENCEANHEKSPSGERRLSAAAAFGPRETEETGAVQPTSA
DPPPGGSQVLGKCHKTLLEQVQNPLQNGDSVNPETFAIHIGDLEANLTVCQADKHPVEDV
KNQHVQGACRAERLLAINVPPRRSLRSSARQRASQVSKDQSERGCSYPMGSEDPASLGLP
AVDPHACGTLFFRSLQWLAPRLGIRDFHLPDEEFGPLKLEKLESSPVNDLEIFVPSVLGD
DAASEDTQGAQMSPEEKRPQSNLISPFKNVLPRLPHSENPACKKELSTHELLFTPLGPVL
AGAPTQPQSQISSSVFPVVGATPAVLPSVHSKVFPNTPSVPPSQASLHSSKGASAQVVDG
GECKDCAVPLHLDSCGTGSARKEEEQGTVFPLEAESSPDNKFDEAVALEKRQQLESKQQR
SCRASPEQKKDVAEQFTPVLLDGLTEESLQLVSKLKDSSNSCAVDVSTMWWDAAGSRELC
VVTACESSISLWKPLASDCWGKVYTWQLREIPVIQIVPLPDTCNLVCIALGDLEIGEIRL
LLYSAEDDSFKQSLVKTGNIKAVLGLKDRRLISSSRTMHEQQVEIVLLSETGRSRDGQTL
MPPEETVLAFAEVEGMRDALVGTTAVNSIVVWNLKTGQLLKKMHVGYSYPASICHRAYSD
SGLLFVVLSHPHAKESESCGNPAFRVIAFNPKTARSTGVMFSSLPPGCAGRYLEGDVRDA
SAAAVLT
NT seq
3622 nt
NT seq
+upstream
nt +downstream
nt
gttctagagataacatatctcctagctctgacaaacacgaaacctctcagttacagacta
aaacctgctctgatcctgacacagagaagaaaacatctgtcacgtttaaacacgttcccg
aattcaccagtaatgaggctagcttgccagacagctcactggtggaaagcatacaggcta
gccaggaaaacctgtgctgtgaaatcattaggcctgccacagaggagaaaaaaccccaaa
cctccagcagtttgttgaagctgagaaggcggatgaaggctttggtgtcggaggaaaggg
aatcagtgtgtgatgtgcagataatcaacactggtgaaatggtgaaaaatcaaagtgcca
gtatagaggaacttcggtctccagtcttcaggcgaagcagtctctcgaacactgaggaaa
aggctcagagaacatccagaccagcacttgtggggagagaagaaaacagtttcactcctc
ccgatgcagcgttcagagttgtacaagacatgcttgaagacagtgtccctccaggagtgc
ctgagctgttcccatgcacactgaaggacagcagcgatgtctggcagcctgagtcctcgg
gtgctgtggtgacatccgataaccatgaacctgcatggctgtgttcagagaacagtgact
ctgttttacttgacatcagtggtgatggaggaaaagaatcttccagtataataaaacaaa
cggacagtgagagtatgtatgaagatcagggagaattacgtaggctcttggatttaatgt
cagaaaacgaagtattgcccactggtggcaacaacactataactaatgaaagcaaaagcc
atgaaggaaatcaaagtgatgctaatggcttaaatccctttcctgcagatctttctgtgg
gcaacgttgaggaacagttggagaatcaacagcttgaacttcagtcaaggctttctgatc
cagaagaggtgacagctgctgaaagcgcattgaactcttgcacagtggttgaagggcttc
tctttccagttgaatactatgtcaggacaacgcgacgcatgtctaattgccagaggaaag
tggaccttgatgctgtgattcttagccagctgggcagaagcaagaaaggtcagcgaagta
agtgtaagcagaaagatgcaaattcagatcgcccctcccaagaaagagttgaaaacaatt
tggagtcgggggtcacgccattcctttttcttgactcagaaaatgatccagcaaattcag
gtagtcctcataaatctctgcctccatccagtggtagcagcacttcacttggatcgattt
ctcagaacagtatcactagcacaaagcgagatcagagacgatcgcagaggaaacaaaagg
gaaggaggaagtctgcctgcaaaccccccgtgcatcaggtgccacaggaacttgtagaga
gtttggatctcgtaacaatgaggcaaagcagtagtctgctgtcaaatgagtgtcagagtg
aaaaggaaaactgtgaggctaatcatgaaaaatcaccttcaggtgagagaaggttgtctg
ctgctgcagcttttgggcccagagagacagaagagactggtgctgtacagccaacgagtg
ctgatcctcctcctggaggaagccaagtgcttggcaaatgccataagactctgttagaac
aggttcaaaatccacttcagaatggtgattctgtgaacccagaaacttttgccatccata
tcggagatctggaagccaacttaactgtgtgtcaggctgataaacatccagtggaggatg
ttaagaaccagcatgtgcaaggagcctgcagggcagagcggctcctagcaattaatgtcc
ctccgcgccgctccctgcgttcctctgcaagacagagagcgagtcaagtctcgaaagatc
agagcgaaagaggatgtagctatccaatgggttcagaggatcccgcatctcttggcctcc
ctgctgtggaccctcacgcttgcggcactctcttcttccgcagtctccagtggctggccc
ccagactaggtatcagagactttcacttaccggatgaggaatttggaccactaaagcttg
agaaattagaatcttcccctgtgaatgatttggagatttttgttcctagtgtgcttggag
atgatgcagcttcagaggacacacaaggtgcacaaatgagtccagaagaaaaaaggcccc
aaagtaatttgatttcacctttcaaaaatgtattgcccaggttacctcattcagaaaacc
cagcttgcaagaaggaactttccacccatgaattgctatttactcctctggggcctgtct
tagctggtgctcccactcagcctcagtctcagatttcctcatctgttttccctgtcgtgg
gtgcaaccccagctgttttaccatcagtacacagcaaggtcttccccaatacaccttctg
tacctccctcgcaagcaagcctgcattcttccaaaggggcatctgcccaggttgtggatg
gtggggagtgcaaagactgtgctgttccgctgcacttggacagttgtggcacaggatctg
ctagaaaagaggaggagcaaggtacagtgtttcctttagaagctgaaagcagtcctgata
ataaattcgatgaggctgtggccttggagaagcgtcagcagttggagagcaaacagcaga
gatcctgcagagcttctcctgaacagaagaaagatgtagcagaacagttcactccagtac
tgcttgatggcctgacagaagagagcttgcagcttgtgtcaaagctaaaggattcttcaa
attcctgcgctgtggatgtgagtaccatgtggtgggatgcagcgggcagcagagagctgt
gtgtggtgactgcttgtgagagttccatctccctgtggaaacccctggcatctgactgct
ggggaaaggtctacacttggcagctgagagagattcctgtaatacagatcgttcctctgc
cagacacctgtaatcttgtgtgtatagcattgggagatttggagattggagaaataaggc
tcttgctttattctgctgaggatgactcattcaagcaatcactagtaaaaactggaaata
taaaagctgttcttgggctaaaggataggagactgatcagcagcagcaggaccatgcatg
agcagcaagtagaaatagtattgctttcagagacgggaagaagcagggacggacagactt
tgatgccccctgaagaaactgttttggcttttgctgaagtagaaggaatgagagatgccc
tggttggcaccactgcagtgaacagcattgttgtttggaatttgaaaacaggccagctcc
tgaagaagatgcacgttggttattcctacccagcttccatctgccatcgagcatattctg
actctggccttctgtttgttgttttaagtcatccacacgccaaagagagtgagtcctgtg
gaaaccccgcattccgcgtcatagcgttcaaccccaaaacagccaggagcacgggagtga
tgttctcctcccttccacctgggtgtgctggaaggtacctggagggtgacgtgagggatg
cttctgctgcagccgtgctgac
DBGET
integrated database retrieval system
