Phaethon lepturus (White-tailed tropicbird): 104616566
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Entry
104616566 CDS
T08325
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104616566 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plet03041
]
104616566 (DDX5)
03009 Ribosome biogenesis [BR:
plet03009
]
104616566 (DDX5)
Enzymes [BR:
plet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104616566 (DDX5)
Spliceosome [BR:
plet03041
]
Complex A
U1 snRNP components
U1 related factors
104616566 (DDX5)
Complex B
104616566 (DDX5)
Ribosome biogenesis [BR:
plet03009
]
Eukaryotic type
Pre-60S particles
Helicases
104616566 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
104616566
NCBI-ProteinID:
XP_010279916
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MRFGAPRFGGSRGGPLSGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPDVVRRTVQEV
EQYRSSKEVTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQGWPVALSGLD
MVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYSRA
CRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRM
LDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHNI
LQIVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRDGWPAMGIHG
DKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTA
RSTKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLLQLIEDRGSGRSRGDRRDRYSA
GKRGGFSSFRERENFERNYGALGKRDFGAKTQNGAYSAQSFSNGTPFGNGFAAAGMQAGF
RAGNPAGAYQNGYEQQYGSNIANMHNGMNQQQYAYPATGAAPMIGYPMPTSYSQ
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcggtttggagccccccgttttggaggaagtagagggggacctctctctgggaagaaa
tttggaaaccctggggaaaaacttacaaaaaagaaatggaatttagatgagctgcccaaa
tttgagaagaacttctatcaagaacatcctgatgtagttagacgtactgtgcaagaagtt
gaacagtacagatcaagcaaagaagtcacagttaggggccataactgtccaaaaccaatt
ataaacttttatgaagctaactttcctgcaaacgttatggaagtaattcagaggcagaac
ttcactgaaccaactgctattcaagcacaaggttggcctgttgcactgagtggattggat
atggttggagtggcacagactggatcagggaaaacactgtcttatttgttgcctgctatt
gtgcatataaatcatcagccattcctggagcgaggagatggacctatttgtcttgtgctg
gcaccaactcgtgaactggctcaacaagtgcagcaggtagctgctgaatatagcagagca
tgccgtttgaagtctacatgtatttatggaggtgctccaaagggaccacaaattcgtgac
ttggaaagaggtgtggaaatctgtattgcaacacctggaagacttatagacttcttagaa
gctgggaagaccaatctcaggaggtgtacttaccttgttcttgatgaagctgacaggatg
cttgacatgggatttgaacctcagatcagaaaaattgtggatcagataagacctgacagg
cagactctgatgtggagtgccacatggccaaaggaagtaaggcagctggctgaagacttt
ttgaaagaatatgtacacatcaacattggtgcgttagaactaagcgcgaaccacaacatt
cttcagattgtggatgtgtgtcatgatgtggagaaagatgacaagcttattcgtttgatg
gaagaaataatgagtgagaaggaaaataaaacaattgtgtttgtggaaaccaaaagacgg
tgtgatgatcttaccaggaaaatgaggagagatgggtggccagcaatgggtattcatggt
gataaaagccagcaggagagggactgggttctaaatgaattcaaacatggaaaagcacca
atcctgattgctacagatgttgcatccagaggtctagatgtggaagatgtgaaatttgtc
atcaattatgactaccctaactcctcagaggactatatccaccgaattggacgaactgcc
cgcagtaccaaaacaggcacagcatacacattctttactcctaacaatattaagcaagta
aatgacctcatctctgtgcttcgggaggctaatcaagccatcaaccccaaattgcttcag
ttgattgaagacagaggttcaggtcgttcccgaggtgaccgacgtgacagatactctgcg
ggcaaaaggggtggatttagtagttttagagagagggagaactttgagagaaactatggt
gcactaggaaagagagactttggagcaaaaactcaaaatggggcctacagtgcccaaagt
ttcagtaatggaactccttttggaaatggctttgcagctgcaggcatgcaagctggcttc
agggctggtaaccctgcgggagcttaccagaatggctatgaacagcagtatgggagtaat
attgcaaatatgcacaatggcatgaaccaacagcagtatgcatatcctgccactggtgct
gctcctatgataggttacccaatgccaacaagttattctcaataa
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