Phaethon lepturus (White-tailed tropicbird): 104616875
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Entry
104616875 CDS
T08325
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet04145
Phagosome
plet04814
Motor proteins
plet05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104616875
09142 Cell motility
04814 Motor proteins
104616875
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104616875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plet03036
]
104616875
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
plet04812
]
104616875
Chromosome and associated proteins [BR:
plet03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
104616875
Cytoskeleton proteins [BR:
plet04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
104616875
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WDR55
WD40
Beta-prop_EML
Dynein_IC2
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_WDR11_1st
Beta-prop_IP5PC_F
Beta-prop_SPT8
WD40_RFWD3
Nbas_N
Motif
Other DBs
NCBI-GeneID:
104616875
NCBI-ProteinID:
XP_010280333
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
VRPLRVVTADTCLFHYLVPPPTSPSSKSVSTPSEAGSQDSGDGAVGSRRGPLKLGMAKIT
QVDFPPREIVTYTKETQTPVMTQPKEDEEDEDDVVAPKPLVEPEEEKTLKKEEEEEAAPH
ELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFDYSGRDLEDKEGEIQAGAKLS
LNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHEPDGVALVWNMKYKKTTPE
YVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYC
VNVVGTQNAHNLISISTDGKICSWSLDMLSQPQDSMELVHKQSKAVAVTCMSFPIGDVNN
FVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGINCHAAVGPVDFSHLFVTSSFDWTV
KLWTTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGMGRLDLWNLNNDTEVPTASIT
VEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVPRSDEWTRFGRTLAEINANRA
DAEEEAATRIPA
NT seq
1661 nt
NT seq
+upstream
nt +downstream
nt
ctgtgcgacctctgcgagtagtaacagcggatacctgtctgtttcactatttagtccctc
ctcctacctctccgtcttccaaatctgtgagtacaccaagtgaggctggaagccaggact
ctggtgatggcgctgttggatctagacgtggacctcttaaacttggaatggccaaaatta
cacaagttgactttcctcctcgagaaattgttacatatacaaaggagacgcaaacacctg
ttatgactcagccaaaggaagatgaggaagatgaagatgatgtggttgcaccaaaaccgt
tagttgaacctgaggaagaaaaaacattaaaaaaagaggaggaggaagaagctgcacctc
atgaacttacagaagaggaaaaacaacagattctgcattctgaagaatttttaagtttct
ttgaccactccacgaggattgttgaaagagccctttctgagcaaatcaacattttctttg
actacagtggaagagacttagaagacaaagaaggagagattcaagcaggagcaaaactgt
ccttaaataggcagttttttgacgaacgttggtcaaagcatcgtgttgtcagttgtttgg
actggtcatctcagtacccagaattacttgtagcctcttacaacaacaatgaggatgcac
ctcatgagcctgatggggtggcccttgtatggaatatgaagtacaagaaaactaccccag
agtatgtctttcactgccagtcagcagtgatgtcagctacatttgcaaaatttcatccca
atctggtggttggtggcacatactcaggccaaatagtgctatgggataatcgcagcaata
agagaaccccagtgcagagaactccactttcggctgctgctcacacgcacccagtatact
gtgtaaatgtcgttgggacccagaatgctcataatttgattagtatctcaactgatggga
aaatatgctcttggagtctggacatgctttcccagccacaggatagcatggagctcgttc
acaaacagtccaaggctgtggctgttacatgcatgtccttccctattggagatgtcaaca
actttgttgttggcagtgaagaaggttcagtgtacactgcatgccgtcatggcagcaaag
ctggaatcagtgagatgtttgaaggacaccagggaccaatcacgggtatcaactgccatg
cagcagttggacctgtagacttctcacatctttttgtcacctcttcttttgactggacag
taaagctttggacaactaagaataacaaacctctctactcctttgaagacaactcagatt
atgtttatgatgtgatgtggtctccaactcaccctgccttgtttgcctgtgtggatggga
tgggcaggcttgacctgtggaatctcaacaatgatactgaggtgccaacggcaagcatta
ctgtggagggcaatcctgctctgaaccgtgtaagatggacacattctgggagagagatcg
ctgtaggtgattcagagggacaaatagttatatatgacgtgggagagcaaattgccgttc
ctcgcagtgatgagtggactcgatttggtcgaacactggcagaaataaatgcgaacagag
ctgacgcagaagaggaagctgcaacccgcataccagcgtag
DBGET
integrated database retrieval system
