Phaethon lepturus (White-tailed tropicbird): 104617531
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Entry
104617531 CDS
T08325
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet03030
DNA replication
plet03410
Base excision repair
plet03420
Nucleotide excision repair
plet03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104617531 (RFC4)
03410 Base excision repair
104617531 (RFC4)
03420 Nucleotide excision repair
104617531 (RFC4)
03430 Mismatch repair
104617531 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plet03032
]
104617531 (RFC4)
03036 Chromosome and associated proteins [BR:
plet03036
]
104617531 (RFC4)
03400 DNA repair and recombination proteins [BR:
plet03400
]
104617531 (RFC4)
DNA replication proteins [BR:
plet03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104617531 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
104617531 (RFC4)
Chromosome and associated proteins [BR:
plet03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
104617531 (RFC4)
DNA repair and recombination proteins [BR:
plet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104617531 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
104617531 (RFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_assoc_2
Rad17
AAA_30
AAA_16
AAA_22
AAA_11
DUF815
Mg_chelatase
AAA_24
AAA_14
SLFN-g3_helicase
AAA_28
RuvB_N
AAA_19
AAA_5
TIP49_C
AAA_7
AAA_23
DNAX_ATPase_lid
AAA_3
ResIII
Motif
Other DBs
NCBI-GeneID:
104617531
NCBI-ProteinID:
XP_010281179
LinkDB
All DBs
Position
Unknown
AA seq
365 aa
AA seq
DB search
MQAFLKGPSSISTKPPAAKERGAAGTAGSSGEGKRLKPIPWVEKYRPKNVDEVAFQDEVV
AVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELYGPELFRQRVLELNASDERGIQVI
REKVKAFAQLTASGSRSDGKVCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLI
CNYISRIIEPLTSRCSKFRFKPLSDKIQQQRLLDVSEKEHVKISSEAVSYLVKVSEGDLR
KAITFLQSATRLMGGKEITEKIVTEIAGVIPKEATDELLFVCQSGSFEKLETLAKNLINE
GYAVAQLVNQLHDTVVESEDYSDKQKSVIAEKLAEVDKCLADGADEYLQLMSLGALVMQQ
LTQNT
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccttcctcaaaggcccgtcttccatcagcaccaagccccccgctgccaaggag
aggggcgcggccggcacagcggggagcagcggggagggcaagaggctgaaacccatcccc
tgggtggagaagtatcgccccaaaaatgtggatgaagttgccttccaggatgaagttgtt
gctgtgctgaaaaagtccttggaaggtgctgatcttcccaatctgttgttttatggccca
cctggaactggaaagacttccactattttagcagctgctagagaactctatgggcctgaa
ttattccgacaaagagtacttgagctaaatgcttctgatgagcggggaatacaagtgatt
cgggaaaaagtcaaggcttttgctcagctaactgcatctggaagccgttcagatggtaaa
gtttgtcctccttttaaaattgtaattctggatgaagcagactcaatgacttcagcagcc
caggcagccttaagacgcacaatggaaaaagaatctaaaacaacacgtttctgccttatt
tgtaactacatcagcagaataattgaacctttaacatctcgatgctccaaattccgcttc
aagcctttgtcagacaaaatccaacagcagcggctgttggacgtttctgagaaggaacat
gtgaaaatcagtagtgaggcagtatcttaccttgttaaagtgtcagaaggggacttaaga
aaagcaattacttttcttcaaagtgccactcgcctaatgggtgggaaagagatcacagag
aagatagtcactgaaattgctggggtcatccctaaagaagcaactgatgaactcctattt
gtgtgccagagtggttcatttgagaagctggaaacactggcaaagaatctcataaatgaa
gggtatgctgttgctcagctggtaaaccagctgcatgatactgtcgttgagagcgaagat
tacagtgacaagcagaaatctgtcatagctgagaaacttgcggaagtagacaaatgcttg
gcagatggtgctgatgaatacttgcagttgatgagtctcggtgcccttgtgatgcagcag
ctaacacagaacacataa
DBGET
integrated database retrieval system
