Phaethon lepturus (White-tailed tropicbird): 104618477
Help
Entry
104618477 CDS
T08325
Name
(RefSeq) protocadherin-11 X-linked-like
KO
K16498
protocadherin delta 1
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104618477
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
plet01009
]
104618477
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plet04515
]
104618477
Protein phosphatases and associated proteins [BR:
plet01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104618477
Cell adhesion molecules [BR:
plet04515
]
Cadherins
Protocadherins
104618477
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
K319L-like_PKD
Fibulin_C
Cadherin_4
TMEM154
Big_9
VirB8
DUF6249
Motif
Other DBs
NCBI-GeneID:
104618477
NCBI-ProteinID:
XP_010282383
LinkDB
All DBs
Position
Unknown
AA seq
1010 aa
AA seq
DB search
MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVALSSP
LQFKLVYKTGDVPLVRVEENTGEIFTTANRIDREKLCSGIFSENRCFYEVEVAVLPDEVF
RLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLK
GQNVFGLDIIETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDGGSPPRSSTAILQVTVT
DVNDNRPVFKENDIEVSVPENAPVGTSVSQLHATDADLGSNAQIHFYFSNQISSLAKRLF
AIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTINVTDINDNVPSIDTRYI
INPVNGTVLLSEKAPLNTKIALITVMDKDADLNGKVTCFTDHDVPFRLKPVFDNQFLLET
ATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNA
PGTQLTKISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTV
LAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLPMYGTVGLITVTDADSG
ENAAVTLSILNGRDNFIIDPLTGVIRPNITFDREHQGSYTFQVKAVDGGRLQRSSTAKVT
INVVDVNDNRPVFVIPSSNYSYELVPTSASPGSVVTKVFAVDNDTGMNAELRYSIIGGNS
RGLFTIDQLTGNITLKEKVITSDHGLHRLVIKVNDLGQPESLYTIALVHLFVNETVTNSS
YVQELVRRNMETPVGQNVGDGEITPQTNDYVKIIIAIIAGTMTVILVIFVTALVRCRQTP
RHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVTIEESKPDDPGHEHING
TLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVPPKKHHV
IQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGPIHTRQL
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggacttgctgtctggaacctacctcttggcagtcttattagcctgtattgtatttcaa
tctggggcacaggagaagaattataccgtgcgagaagaactgcctgaaaatgtcctcatt
ggcaatttgctcaaggatctcaacctaacgctggacccggatgtggccctttcctcaccg
ctacagttcaaacttgtgtataagactggggatgtaccattagtacgggtggaggagaac
actggtgagatattcacaactgcaaatcgcatagaccgagagaagctgtgctctggcatc
tttagtgagaatcgctgcttttatgaggtggaggttgctgttttgcctgatgaagttttc
agactggtcaagatcagattcctaatagaggatataaatgacaatgcccccctcttcccc
tccacggttattaacatctctatacctgaaaacacagcaattaattctcgctattctgtc
ccatctgccatcgatccggacattggtgtgaatggtattcaacattatgaactcctcaag
ggtcaaaatgtatttggtcttgatataattgagacacctgagggagataagtggcctcaa
ctgattgtccaacagatcctggatagggagcagaaagatacctatgtgatgaaaattaaa
gttgaagatggtggaagccctccaagatctagcactgccatcctgcaagtcacagtgact
gatgtgaacgataatcgcccagtcttcaaagagaacgacattgaagttagtgttccagaa
aatgctccagtgggcacctctgtttctcagctccacgccactgatgcagacctgggctca
aatgcacaaatccacttctattttagcaatcagatctctagtttggccaaaaggttgttt
gccattgataacaccactggcctcatcactataagagaaccactggacagggaagaatct
cctgtacacaaattaactgttttggcaagtgatggcagttcaactccatcaagagcaaca
gtgactattaatgtcacagatattaatgacaatgtcccatcaatagacacaagatacatc
atcaatccagtgaatgggacagtgcttttgtctgagaaggctccccttaatacaaaaatt
gcattgataactgtaatggacaaagatgctgatctgaatggaaaagttacttgttttaca
gaccatgatgtcccttttaggctaaagccagtgtttgataatcagtttctcctggagaca
gccacatttctagattatgaagccacacgggaatacgccattaaaatagtggcttcagat
tcagggaaacctcccctaaaccagtctgcaatgctcctgatcaaaattaaagatgaaaat
gacaatgccccagtttttacacagcctatcataggtctttccatccctgaaaacaatgct
ccgggtactcagctaaccaagataagtgctacggatgctgacagtgggcgcaatgctgag
atcagctatatcctgggttctgatgcaccccctattttcaaccttgaccgccgtacaggc
attctgacagcagtgagaaagctggacagagaaaagcaagacaggtattccttcactgtg
ctggctaaggataatgggatgccacccttgcagaccaatgctaccgtgacagtgtcggtc
ctggaccagaacgataacagccctgctttcacacataatgaatataatttctatgtgcca
gaaaacttacccatgtatggcacagtggggcttatcacagttacagatgctgactctgga
gagaatgctgcggtcactctctctatattaaatggtagagataatttcattatagacccg
cttactggtgtaataagacctaatattacctttgatagggaacaccaagggtcatatact
ttccaggtgaaagctgtggatggaggaagactgcagcgttcctcaactgccaaagtgacc
atcaatgttgttgatgtaaatgacaacaggcctgtttttgttattccttcatctaattat
tcgtatgagttggttccaacatcagccagtccagggtctgtagttactaaagtctttgca
gttgataatgacacaggaatgaatgcagagctccgctatagcatcataggtgggaactca
aggggcttgtttacaattgaccaattaacaggcaatattactttgaaagagaaggtaatt
acgtcagatcatggtttgcacagactggtgataaaagtcaatgacctaggacagccggag
tccctttataccatagctcttgtgcatttgtttgtgaatgagacagtcaccaacagttcc
tacgtacaagagctagtgcgcaggaatatggaaactccagttggacagaatgttggggat
ggtgagataaccccacaaaccaatgattatgtcaagatcatcattgccattattgcaggc
actatgacagttattctggtaatttttgttactgctttagtacggtgccgccagacacct
aggcacaaggttgtccaaaaaaacaagcagagtggtgaatgggtttccccaaaccaagag
aataggcagatcaagaaaaagaagaagaagaagaagcgctctccaaaaagtctcctcctc
aactttgtgactattgaagaatctaagcctgatgatcctggccatgagcacataaatggc
actttagacattcctgtagagctagaagaacagactatgggaaaatataactgggccacc
acaccaaccacatttaagcccgatagcccagacttagcaaagcactacaagtctgcttct
ccgcagcctacctttcaaattaaacctgagactcctgtaccccccaagaagcaccacgtc
attcaggaactgcctctagataacacctttgtggtgggctgtgactcgctctccaaatgc
tcatcaagcagctcggacccttacagtgtttctgaatgcagctgtcaaggaggcttcaag
accccaggccccatacacaccagacagctctga
DBGET
integrated database retrieval system
