Phaethon lepturus (White-tailed tropicbird): 104619156
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Entry
104619156 CDS
T08325
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet03013
Nucleocytoplasmic transport
plet03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104619156 (SRRM1)
03015 mRNA surveillance pathway
104619156 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plet03019
]
104619156 (SRRM1)
03041 Spliceosome [BR:
plet03041
]
104619156 (SRRM1)
Messenger RNA biogenesis [BR:
plet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104619156 (SRRM1)
Spliceosome [BR:
plet03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
104619156 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
BAF1_ABF1
Motif
Other DBs
NCBI-GeneID:
104619156
NCBI-ProteinID:
XP_010283247
LinkDB
All DBs
Position
Unknown
AA seq
881 aa
AA seq
DB search
GTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVV
IEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPTAFLELK
KEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPSPRRRSSP
VRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPSVKPKETVVQEATSNNDIPKAPK
PEPPVPEAKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPRRRHRSRS
RRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPP
KKPPKRTVSSPPRKTRRLSPSASPPRRRHRPSPPASPPPKPRRSPTPQQSNRARKSRGSV
SPGRASAPKRKSTEKRESPSPAPKPRKAELSESEEDKGGKMAAADSVQQRRQYRRQNQQS
SSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKESSPRRRRRSPSPP
PARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRT
ASPPPPPKRRASPSPQSKRRVSHSPPPKQRSSPTAKRRSPSISSKHRKGSPPSRSNRETR
SPPQNKRHSPSPRPRASHTSASPPPPRRGASASPQRRQSPSPSTRPIRRVSRTPEPKKTK
ASTPSPRSARRVSSSRSASGSPEAAPKKHQGPPSPTRSRSPSANWSPAKKAKSPTQSPSP
ARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAAAAAAAVAAADTTSVQEDQE
AETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
ggaacaagtgcagaacaggacaatcgcttcagcaacaagcagaagaagctgttgaagcag
ttgaaatttgcagaatgcttagaaaagaaggtggacatgagcaaagtaaatctggaagta
atcaaaccatggataacaaaacgagtaacagaaatccttggatttgaagatgatgtagta
attgaatttatattcaaccagttggaagtgaagaatccagattccaaaatgatgcaaatc
aacctgactggttttttgaatgggaaaaatgctagggagttcatgggagaactgtggcca
ctgctgttaagtgcacaagaaaacattgctggtattccaactgcatttctggaactgaag
aaagaagaaataaaacagcgacagatagagcaagagaaactggcttctatgaagaaacaa
gatgaagacaaggagaagagggataaggaagacaaagacaacagggaaaaaagagacaga
tccaggagtccaagaagacgcaaatcaaggtctccttcccctcgaaggaggtcgtcgcct
gtcagaagagagcggaaacgcagccattctcgctcccctcatcacagaaccaagagccgt
agtgctactcctgcaccagaaaagaaagaggcgactcctgagccagaaccctctgtgaaa
ccaaaggagactgttgttcaagaggcaacttcaaacaatgatatcccaaaagctcctaaa
cctgaacctcctgtaccagaggctaaggaaacctcaccagaacgtaattcaaagaaggag
agagagaaggagaaagagaagactcgtcaaagatccccaactcggtccaagtcaaggtca
agatctcgatcacgttctccatctcattctcggcctagaaggcgtcatagatcacggtcg
agaaggcgaccaagcccgagacgacggccatctccaaggaggaggagccctccaaggcga
atgcctcccccacccagacacagaagaagcagatcccctgtgaggcggagaagacggtca
tcagcatccttatctggcagtagctcttcctcctcttcctcacgttcccgatcaccacca
aagaaaccacctaaaagaactgtatccagtcctcctcgtaaaacacgtaggctctctcct
tctgcaagccctcctaggcggaggcacagaccatccccaccagcaagtccacctccaaaa
ccacgtaggtctccaacaccccagcagtcaaatcgtgcaagaaaaagccgtggctctgtc
tcgcctggcagagcatcagcacccaaacgtaagagtactgagaaaagagaatctccttcg
ccagcgccaaaaccaaggaaagcagaactgtctgaatcagaagaagataaaggaggtaaa
atggctgcagcagactctgttcaacagaggcgtcagtacagaaggcaaaatcaacagtct
tcatccgattctggttcttcatcttcatctgaagaggaaagacctaaaagatccaatgtg
aagaatggggaagttggtagacgtcgacgccattcacattcacgcagtccatcaccatct
ccacgaaaacgacagaaggaatcctcccctcgcaggaggaggagaagtccatcgccccca
ccagccaggcggcgacgctctccgtcacctgcccctcctcctcggcggcggcggtcacct
tcattacctcgtcgaaggtctccatcaccaccgccacgcagacgctcaccttctccacgg
agatactctccaccgatacagaggcgatattctccttctccaccacctaagagaagaaca
gcttctcctcctcccccacctaaacgaagggcatcaccttctccacagtcaaaacgcaga
gtctcccattcaccaccacccaaacaaaggagctcgccaactgctaaaaggcgttcacct
tcgatatcttccaagcacaggaaggggtctcctcccagtaggtccaatcgagaaacacgt
tctccaccacaaaacaaaaggcattcaccttcaccacggcctagagcttctcatacctct
gcaagcccaccgccaccacgaaggggagcttcagcttcaccccagagaagacagtctcca
tctccaagcacgagacccatcaggagggtgtcgagaacgccagaacctaagaagacaaag
gcttccacgccgagtccacggtctgcgagacgggtgtcttcatcacggtctgcatcagga
tcacctgaggcagcaccaaaaaaacatcaaggacctccatctcctactcggtctcgttct
ccttctgcaaactggtcacctgcaaaaaaggctaaaagcccgacgcagagcccatcacct
gcaaggaattcggatcaagaagggggtggaaagaagaagaagaaaaagaaggataagaag
cataaaaaggataaaaagcacaagaaacacaaaaaacataagaaggagaaggctgcagcg
gctgcagcagctgctgctgtggctgcagcagataccacctcagtacaggaagaccaggaa
gcagagacagaacccaaaaaggagacagaaagtgaaccagaagacaaccttgatgatcta
gaaaaacacctgcgagagaaggcactgagatcgatgaggaaggcgcaagtgtcaccacca
tcctag
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