Phaethon lepturus (White-tailed tropicbird): 104619187
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Entry
104619187 CDS
T08325
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet03013
Nucleocytoplasmic transport
plet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104619187 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
104619187 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plet03019
]
104619187 (THOC2)
03041 Spliceosome [BR:
plet03041
]
104619187 (THOC2)
Messenger RNA biogenesis [BR:
plet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
104619187 (THOC2)
Spliceosome [BR:
plet03041
]
Complex C
Other components
EJC/TREX
104619187 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104619187 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
104619187
NCBI-ProteinID:
XP_010283276
LinkDB
All DBs
Position
Unknown
AA seq
1601 aa
AA seq
DB search
MIRLSWYNSNTQKPEGQSLKTITIIVFLVQLCRTLSENKSHDNMCFRDTQQALYELAYHV
VRGNLKHDQASNVLGDVIEFREDMPSILADVFCILDIETSCLEEKSKRDHFTQLVLACLY
LVSDTVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLI
AELGQDLSGNITSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYM
YMCEPQTLCHILGFKFKFYQDPSGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAII
EEHKREIVEAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIG
DWQHAQSIMDQMPPFYATSHKPIAIALCQLVHVTIEPLYRRVGVPKGAKGSPISSLPNKR
APKQADSFEDLRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEFQSDGSKQEDKEKM
EILFSCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHP
LLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITP
VVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIE
LAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYF
GQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDT
LVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKA
EKGNKQQHKVHKYITSCELVMAPVHDAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPH
SSYDREVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRL
KLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLC
YDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRVIYEKECGNYPGFLTILRA
TGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPK
VLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPFMIPENEFHHKDPPARNA
VAATVQNGPGGAGMPTSLTINTVRLEEGTTEETEKLKEKSQGVVKVINKAVNATPKVTTS
NGNSASNSKIIKEKDDKEKSGKEKDKEKKDKTPAAIPEMKALGKDGKDKPKEERANKDDK
PREIKEKTPKSDKEKEKVKKEEKASKEEKSKTVVTIIESKSTAEKEREKEPSRERDVAKE
MKSKENAKGGEKMPVAGSLKSPVPRSETSESEREQKRRKVDTHSSPSHSSTVKDNLNELK
DSSAKHYINHTTPTLSKSKEREVDKKDLDKSRERSREREKKDEKDRKDRKRDHSNSDREV
PQDSTKRRKEENGTTGSSKHSKSESPSDSPRLNEKEKEKNKSKSSGKEKGDSIKAEKMEK
SSSGSKKESRHDKEKTEKKEKRDSTGGKEEKKHHKSSDKHR
NT seq
4806 nt
NT seq
+upstream
nt +downstream
nt
atgatcagattgtcatggtataacagtaatacccaaaaaccagaaggccagagtttgaaa
actattacaatcatagtatttcttgtgcaactatgtcgcactcttagtgaaaacaaaagc
catgataatatgtgtttccgagatacccagcaggctttgtacgagcttgcataccacgtt
gtcagaggaaacttaaagcatgatcaagcttctaacgttcttggtgatgtcatagaattt
cgggaagacatgccttctatcctagctgatgtattctgcatattagatattgaaacaagc
tgtttagaagaaaaaagtaagagggatcattttacccaactggtattagcctgtctgtat
cttgtatctgacactgtcctaaaggagcgtttagatccagagacactggagtcgttagga
cttatcaagcagtctcaacagttcaatcagaaatctgttaaaataaagacaaaactattt
tataagcaacagaagtttaatttgttaagagaggagaatgaaggatatgcaaagctcatt
gcagaactggggcaagacttatctggaaatatcactagtgatttaatccttgaaaatatc
aaatctttaataggatgttttaaccttgatcccaacagagttttggatattatcctagaa
gtctatgagtgcaggcctgagtatgatgacttctttgtaccactgatagagtcttacatg
tacatgtgtgaacctcaaactctatgccatatccttggtttcaaattcaaattttatcag
gatccaagtggtgagacaccttcctccttatacagagttgccgctgtccttttgcaacat
aatctcatcgatttggaagatctttatgttcatcttcttccaggggataatgccatcatt
gaggaacacaaacgagagatagtggaggccaagcaaattgttagaaaacttacgatggtt
gtcttatcctctgaaaagactgaggaaaaggagaaggaaaaagaaaaagaagaggagaaa
acagaaaagcctcctgataatcaaaagcttggtttattggaagcgttattaaaaattggt
gattggcagcatgcacaaagtattatggatcagatgccaccgttttatgcgacttcacac
aagcctattgcaattgccctttgccagcttgtacatgtgacaatcgaacctctgtaccgc
agagttggtgtacctaaaggagctaaagggtcaccaatttcttctttgccaaacaagaga
gcacccaaacaagcagacagctttgaggacttgagaaaggaagtgttcaacatgctttgt
taccttggtccccatctctcccatgatcccattttatttgcaaaagtggtgcgtcttgga
aaagcatttatgaaagagtttcagtctgatggaagcaaacaagaagataaagagaaaatg
gagatactgtttagctgtttgttgagtattaccgatcaagtcttacttccatctctttct
ttgatggactgcaatgcatgcatgtctgaagaattatggggaatgttcaaaacttttcca
taccagtaccggtaccgtctttatgggcagtggaagaacgaaacatacaacagtcaccca
cttctagtgaaagttaaagctcaaaccatagaccgagccaaatacatcatgaagcgttta
actaaggaaaatgtgaaaccctctggaagacaaattgggaagctcagccacagcaatcct
acaattctgtttgattatattttatcacaaatacaaaaatatgataacttaataactccg
gtggttgattcattgaaatacctcacttcactgaactacgatgttttggcatactgtatc
attgaagctctggcaaaccctgagaaggaaagaatgaagcatgatgacactacaatctcg
agctggctgcagagtctggctagcttttgtggtgcagttttccgaaaatacccaattgaa
cttgctggtctacttcaatatgtagccaaccaactgaaagctgggaaaagctttgattta
cttattttaaaagaggtagtacagaaaatggcaggaatagaaattacagaagaaatgaca
atggaacaattggaagcaatgactggtggagaacaactaaaagctgagggtggatacttt
ggccaaatcaggaatacaaaaaaatcttctcagagattgaaagatgcgttattggaccat
gatcttgcccttccactgtgcctgcttatggctcaacagagaaatggtgtgatctttcaa
gagggaggggaaaaacatctgaagctcgtgggaaaactgtatgatcagtgccatgacacc
ctggtacaatttggtggatttttagcatccaacctaagcacagaggattacattaagcga
gtgccttctattgacgttctctgtaatgagtttcacacacctcatgatgctgcatttttc
ctctcgagacccatgtatgcacaccatatttcatcaaagtatgatgaactaaagaaagct
gagaagggaaataaacagcagcacaaagttcacaaatacattacatcatgtgagctggtg
atggctcctgttcatgatgctgtgatttctctgcaccttcccaaggtttgggatgacatc
agtcctcagttttatgctacattctggtctttgacaatgtatgaccttgccgtcccacat
agtagctatgacagagaagtcaataaacttaaggtccagatgaaagccatagatgacaat
caggaaatgcctccaaataaaaagaaaaaagaaaaagaacgttgcacagctcttcaggac
aagcttcttgaagaagagaagaagcagttggagcatgtgcagagggttctacagagactg
aaactagagaaggataactggcttctggcaaagtctaccaaaaatgagactatcacaaaa
tttttgcagctgtgtatatttcctcgatgcattttttcggcaatcgatgcagtttattgt
gctcactttgtagaactggtgcatcagcagaaaacacccaacttctccacgcttctctgc
tatgacagagttttctctgatattatatatacagttgcaagttgcactgaaaacgaagct
agtagatatggcaggtttttatgctgtatgctggagactgtgactagatggcacagtgac
agagtcatatatgaaaaggaatgtggcaactatccaggctttctaactatattacgggca
actggatttgatggtggaaataaagctgatcaactggattatgagaattttagacatgtg
gtacacaaatggcactataaattaactaaggcttctgttcactgccttgaaacaggtgaa
tatacacatatcagaaatatcctgattgtgctgaccaaaatccttccatggtatccaaaa
gtgctgaacctgggccaagccttggaaagaagagtacataagatatgtcaggaagagaaa
gagaagagacctgacctatatgcattggctatgggctattctgggcagttgaaaagtagg
aagcctttcatgatacctgaaaatgaattccaccacaaagacccacctgccaggaatgct
gtagctgcaacagtacaaaatgggccaggtggtgctgggatgcctacatctctcacaata
aatacagttagactcgaagaaggcactactgaggagactgagaaactaaaggagaagtct
cagggtgtggtgaaagttattaataaagctgtcaatgctacaccgaaggtgacaacaagc
aatggaaacagtgcttctaatagcaaaattattaaggagaaagatgataaagaaaaaagc
gggaaggaaaaagataaagaaaaaaaagacaagactccagctgccattccagagatgaag
gcacttgggaaggatgggaaagataaaccaaaggaagaacgggcaaacaaagatgataaa
ccaagagaaatcaaggagaaaactccaaaatctgacaaagagaaggaaaaagtcaagaag
gaagaaaaagcttcaaaagaagaaaagtccaagacagttgttaccatcattgagtcaaag
tcaactgcagaaaaggaaagagaaaaggagccgtccagagaaagagatgtagcgaaggaa
atgaaatccaaggaaaatgctaaaggaggagaaaagatgccagtagctgggtccttgaag
tcacctgttccccgatcagaaacatcagaatctgagagggaacaaaaacgccgcaaagtt
gatacacattcttctccatcacattcctcaacagtaaaggacaacctcaacgaactcaag
gactcttcagcaaagcactacattaaccacactactccaacactgtccaagagtaaggag
agagaagtggacaagaaagatttggacaagtcaagggaaagatccagagaaagagagaag
aaagatgaaaaggacaggaaagatcgaaaaagggatcattcaaacagtgaccgagaggta
ccacaggattcaactaaacggcgcaaagaggaaaatgggacaactggttcttcaaagcat
agtaaaagtgaaagtccttctgattcccctcgcttaaatgagaaggagaaggagaagaat
aaatcaaaatcttcaggaaaagagaaaggtgattcgattaaagcagaaaagatggagaag
agctcctctggtagcaaaaaggaatcaagacatgataaagaaaaaacagaaaagaaagaa
aaacgagacagtactggagggaaggaagaaaagaaacatcataaatcttcagacaagcac
agataa
DBGET
integrated database retrieval system
