Phaethon lepturus (White-tailed tropicbird): 104619755
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Entry
104619755 CDS
T08325
Symbol
PKD1L2
Name
(RefSeq) LOW QUALITY PROTEIN: polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
plet04040
]
104619755 (PKD1L2)
Ion channels [BR:
plet04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104619755 (PKD1L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Gal_Lectin
Lectin_C
Ion_trans
REJ
GPS
Abhydrolase_9_N
AGA2
Motif
Other DBs
NCBI-GeneID:
104619755
NCBI-ProteinID:
XP_010284049
LinkDB
All DBs
Position
Unknown
AA seq
2519 aa
AA seq
DB search
MTRISQAFEEGSKKSGDVISKTSATQATKLRMWLGIAVLVSLAVCLAVEEAIVDEGIPCS
KYQLAFNHSCYEFVRLQRTFTSAQSWCERGGGHLVFIENEETQEFLQKHIAEDQEWWIGL
ISNALLNETTDGSMIWLDTSNISYSNWYKDQPSLFSSTCGYILKNAKYQWGVTENCSQEF
DFICEFDSGQSIACDNYNATVQCGSGEVIQIGESFYGRKTPHYCVSSEIPLQYDTDEDCS
WISVKDEVAGQCHGLQACQVAADSTFFGDPCPASGSYLSIQYHCKEGLQLVVTDTCFVFE
NITVSLNWLLSPYSGNLSCIISTGDGHAIDPYYPLTLVSSITYRYSSPGEFTVFVECTTS
EWHVTAQKRVTVQDKMDQLSITGCYSQYEPGNSSHCRTLYGEFLWIQVELNGGNGVTYII
LADNVTLTESSAKEGIVPHNLTLDSASQGLLGPGIHQLEIRASSNTTSSEISESIAVHLI
EPVSGLQAALASHGLQLGENLEINVSVSHGAPDKLKFEVIGSNETHSHKEDGPHGEPRTY
VIPVHSEGTFLVKVVAMNAFSNVSLDLGFITVLANSSYKEDSAKEEGSSKTNTQKTNDHK
RKNKIYIKPSRHVDPFTTVTLGWPDNNNNSSFLWSCGACWPEWNECVQQQIILTDQTEVQ
IPPSCLPPPKSAVTVRVTVQNHGNEERQDEQCLYVTAKQELQLEIRCEANCKPVKASDEV
VLSVSGQDSQATYYNWYLDNTFQTKSTVLPPACGLTGFRQDSLVLLQSNASMLKMNSSFL
QTHGEAFQIKVTAMTHRGYGEETHLVSTVPPPEIPSCAVSPKQGSVLTTFTVSCSTPCLA
DSCQSSHNRQLTYCFYLKPNSLLHCGLDSELFPVYLPLGEKENNFILHMTITVSNSYGDT
VQTNASVKVGHTDMIDGNLTLQAVVSEKANTILKDGNNSMSLFQLYKSVTSVLNQETQEE
SFNVSLQMDTRKELRGLMLTTLSAVNITSVQAALKMSEVLKEITYRSEELSVSAQVEASN
TLKDVSASLLTVNTEDSRDDQKLKDAANYLFNAVSNVLQASVEIRATNTSVPEAEQSSVS
HQLLNTVENLQSALLFGKEPDDEPTVLTTPSATMYIHRLQTENMDGTSINISSTSSASFT
LPPASSLSVSGVDDETVDIRMVSFAVNPFFSSDTGFDISGTVGGLSLTDLDGLIIPVSNL
KENIEIMLPRLSATQEDKILLNLGNFSTFQVNVTSENTSIVIHLESEHDIPLILYLGYSY
HPNETNYDMKNHLISIYTLKLKYLCSGEMNTWVLSPEQLVFGEGTYYFMVLQDMGMDSTV
YDRLTIAVTCFASRCVFWDEHQENWNSYGCQVGPKTNPRSTQCLCNHLTFFGSSFFVIPS
AIDVSKTAQLFGTFVDNPVVVTTVGCIFLIYVLVVIWARRKDIQDDAKVKITVLEDNDPF
AQYRYLVTVFTGHRRGAATTSKVTLTLYGLEGESEPHHLTDPDTPVFERGGVDVFLLSTF
FPLGELQSIRLWHDNSGDSPSWYVNRVLVHDLAWDQKWYFLCNSWLAIDIGECVLDKVFP
VATEQDMKQFSNLFFMKTSKGFQDGHIWYSVFSRSPRSSFTRAQRVSCCFSLLLCTMLTS
IMFWGVPKDPAEQKMDLGKIEFTWQEVMIGFESSLLMFPINLLIVQIFRNTRSRPATQGR
EKKPGKNGRVSPSLPPTPQVTQAVSLTPEAVIKDIRRIANSLFKALKIPSLTSVSDLGKS
TNINTLLALVEDIICQQNRAVQEFYDESKKDDPIIVTLGAMDIQEKTRSPTPEKGMSERM
KYSDYNRCLYMQLQRVEMELKLLGPHKFQMPQSYTQAVCQVQHMKNLLGTSRWSLVPSFP
GDGKKSPSSKGLPWWFVFIAWFLVAATSGVSGFFTMLYGLHYGKENSIKWLISMAISFLE
SLFITQPLKVLGFAAFFALVLKKVEHEDEENTAIDGPLSAPGNCLYSDSNPLFGARRDSI
SNIYRPPPAADVEKMKISRMKEQKAFALIREILAYLGFLWMLLLVAYGQRDPNSYYLNKH
IENSFTDGFHDVYSYQDFFTWANTTLVKNLYGSYKGFITDGNSKLVGSARIRQVRVKGDT
CPISPKLQHVIQXXXXXXXXXXXLQTEDTSDYGERWNISIFDNSSDLSSAWQYQSQSQLK
GQPIWGKLAIYRGGGYVTHLGTDPTNASRTLQYLFNSVWIDTFTRAVFVEFTVYNANVNL
FCIISLMFETNALGAFFTSAELQSVRLYPYTNSLHIFVVAAEVIYFLFIVYYMIAQGKLM
KTLRWRYFCSKWNLLEMAIILISWSALSVFVKRAILGTRDISYYQEHKEDCVSFNETARA
DAVLGYLIAFLVLLSTVKLWHLLRLNPKLNMITSTLRRAWGDISGFITVIAIMFLAYSIA
TNLIFGWKLCSYKTLFDSAETMVSLQLGIFNYEEVLDYNPILGSFLIGSCIIFMTFVVLN
LFISVILVAFSEEQKHYQASEEEEIVDLMLMKLFSFFGIKCKKEEKPFTDDPLKSPVND
NT seq
7560 nt
NT seq
+upstream
nt +downstream
nt
atgacaaggatatctcaagcttttgaagaaggcagcaaaaagagtggtgatgtgataagc
aagacgagtgccacacaggcaaccaagctgagaatgtggcttgggattgcagttctagtt
tctcttgctgtatgtttggctgtggaggaagcaatcgttgatgaaggaatcccttgctca
aagtaccagctagctttcaaccattcatgctatgagtttgttagactccagcgtaccttc
acaagtgcccagagctggtgtgagagaggaggagggcaccttgtctttattgaaaatgag
gaaactcaagagttcttgcaaaaacatattgctgaggatcaggaatggtggataggactg
atctcaaacgccctgctgaatgaaactactgacgggtcaatgatttggctggacacttca
aatataagctacagtaactggtacaaggatcagccatctctcttctcatccacatgtggg
tacatcctgaagaatgccaagtatcagtggggtgtgactgaaaattgcagccaggaattt
gacttcatttgtgagtttgattctggacagagcattgcttgtgataattacaatgccact
gtacaatgtggatcaggagaagttattcaaattggagaaagcttttatggacggaagacg
cctcactactgtgtatcatcggagattcctctccagtatgatacggatgaagactgtagc
tggatcagtgtcaaagatgaagtagcaggccagtgtcatggtcttcaggcctgccaggtg
gcagcggatagcactttctttggagatccttgtccagcttccggaagctatttgtctatt
caataccactgcaaggaaggtctgcagctggttgtaacagatacatgctttgtctttgaa
aatatcacagtcagtttgaactggctgctctctccatactctggcaacctttcctgtatc
attagtactggagatggccacgctattgatccttactaccccctaacactggtcagcagc
atcacatatagatattcatctccaggagaatttactgtttttgtggaatgtaccaccagc
gaatggcacgtgacggcacagaagcgggtgactgttcaagataagatggatcaactaagc
attactgggtgctatagccagtatgaacccgggaacagctcccactgccgtacactctat
ggggagttcttgtggatccaagttgaactcaatggaggcaatggagtgacctacattata
ttagcagataacgtgacgctcactgaatccagtgcaaaggaaggaattgtccctcacaat
ctgacactcgacagtgcctctcaagggctgctaggccccgggatacatcagctggagatc
cgagcatccagcaacacaacctcatcggagatctctgagagcattgctgttcacttaatt
gagccagtatctggccttcaggctgcattagcttctcacggtctgcagctgggggagaat
ttagagataaatgtctctgtgtctcatggtgccccagataaactgaagtttgaggtgatt
ggatctaatgaaactcactctcacaaagaagacggccctcatggggaacctcgaacgtac
gtcattcccgtgcactctgaaggtactttcctagtgaaagtggtggccatgaatgccttc
tcaaatgtgagtctagatcttggattcatcaccgtgttggcaaacagttcttataaagaa
gattctgctaaggaagaaggcagctccaaaaccaatacccaaaagacaaatgatcacaaa
agaaaaaacaagatatatattaaaccaagtcgtcatgtggaccctttcacaactgttaca
cttggctggccagacaacaacaataattccagttttctctggtcctgtggagcttgctgg
cctgagtggaatgaatgtgtgcagcaacagataatcctaactgaccaaactgaggtgcaa
atcccaccttcctgccttccccctccaaagtcagcagtgactgtcagggttacagtccaa
aaccatggcaatgaagagaggcaggatgagcaatgtctgtatgtgactgcaaaacaagaa
ctgcaattagaaatcaggtgtgaggcaaactgcaagccagtgaaagctagtgatgaagtt
gttttgagcgtctctggacaggactcccaggcaacatattataactggtatctagataac
acattccaaaccaagtctacagtcctccctccagcctgtggcctgactggattccggcag
gactccttggttctgcttcaaagcaatgcatccatgttgaaaatgaacagctccttcttg
cagacacatggagaagcttttcagattaaagtaacagcaatgactcaccgtggctatggg
gaggaaacacaccttgtcagcaccgtgcccccgcccgagatccccagttgtgccgtgtct
cccaagcagggatcagtgctcaccaccttcacagtctcctgcagcactccttgcttggcg
gattcttgccaatccagtcataacaggcagctcacatactgcttctatctgaaaccaaat
tctctcctgcactgtggcctggattctgaactctttccagtttatcttccacttggagaa
aaggaaaataatttcattttacatatgacaattactgttagcaacagctatggtgataca
gttcaaactaacgcttcggtgaaggttggacacacagatatgatcgatggaaacctgacc
ctgcaggctgttgtatctgagaaggcaaacaccatcctaaaagatgggaacaacagcatg
agtcttttccagctgtataagtcagtgacatcagtccttaatcaggagacccaagaggaa
agctttaacgtatctttacagatggacacacgaaaagagctccgagggctgatgctgaca
actctctctgctgttaacataacatcagtgcaggctgctcttaagatgtcagaagtattg
aaagaaatcacttacaggagtgaagagctgtctgtctcggcacaggtggaagctagcaac
actctaaaagatgtcagtgcttccttgctcactgtaaacacagaggacagcagagatgat
cagaagttaaaagatgcagccaactatctgtttaatgcagtgagcaatgtccttcaagct
tctgtagaaatcagagctacaaacacttcagtgccagaggcagaacagagttcagtgtca
caccagctcctgaatacagttgaaaatctacagagtgcccttctgtttgggaaagaacca
gatgatgaaccaacagtccttaccactccttctgccacaatgtatatacacagattacaa
acagaaaacatggatggcacatccattaacatctccagtaccagctctgccagctttact
ctcccacctgcttcctctctcagtgtttcaggagttgatgatgaaacagtggatataagg
atggtgagctttgccgtgaatccctttttctccagtgacactggttttgacatcagtgga
acagtgggaggtctaagtcttactgatctggatggcttgatcataccagtcagcaatctc
aaggaaaacattgagataatgttaccaaggctttcagcaactcaggaagataagattctg
ttgaatctgggcaattttagtactttccaagtcaatgtcacctcagaaaacacatctata
gtgatccacctggaatctgaacatgacattcctctaatactctacttaggatacagttat
catccaaatgaaactaattatgacatgaaaaatcatctcatttctatatatacattgaaa
ctaaaatatttatgttcaggtgagatgaacacctgggttcttagcccagaacaactcgtt
tttggagagggaacctactatttcatggttttacaagatatgggaatggattccacagtc
tatgacaggctaactatagctgtcacttgcttcgcatcccgctgtgtattttgggatgag
caccaggagaactggaacagctatggatgtcaggtaggaccaaaaacaaatcctagaagc
acacagtgcctctgcaaccatctgaccttctttgggagctccttcttcgtcatacccagt
gccatagatgttagcaaaactgcacagctatttggtacatttgtggacaaccctgtggtg
gtgacaactgtaggatgcatctttctgatatatgtgcttgtagttatttgggctcgaagg
aaagacatccaggatgatgccaaagtgaaaatcacagtactggaagacaatgaccccttt
gctcagtatcgttatcttgtgacagtttttacaggtcaccgccgtggggcagccacgacc
tccaaggtgactctcaccctctatggactagaaggagagagtgagccacaccacctaact
gatcctgatacaccagtctttgagcgtggaggagtggatgttttcctactctctaccttc
ttccctcttggagaactgcagagtattagattgtggcatgataattcaggggacagtcca
tcctggtatgtgaatcgagtattggtccacgacctggcatgggatcagaaatggtacttc
ctctgcaactcttggttagccattgatattggagaatgtgtcctagataaagtgttccca
gtagctacagaacaggatatgaagcagttcagcaatctgtttttcatgaagacctccaag
ggtttccaggatgggcacatctggtactcagttttcagccgctccccgcgaagctccttc
acacgagcccagcgcgtgtcatgttgcttctcactgcttctctgcaccatgctgaccagc
atcatgttctggggagtgccaaaggatccagctgagcagaaaatggatttgggtaagatc
gagttcacatggcaggaagtgatgattggctttgagagctctctcctcatgttccccatc
aacctgctcattgtgcagatcttcaggaacacacgatcccgcccagccacacaggggaga
gagaagaagccgggaaaaaatggtcgagtgtccccaagcctacctcccaccccacaggtc
acccaggctgtctcgctcactccagaggctgtgataaaggatataagaagaattgccaac
tcactctttaaagccttgaagattccatctctcacttcagtatcagatcttggaaaatca
actaacatcaacacacttttggcattggttgaggacatcatctgtcagcagaacagagct
gtgcaggagttttatgatgagagcaaaaaggatgaccctataattgtcacattaggtgct
atggatatacaagaaaaaacaagaagcccaactccagagaagggaatgtctgagcggatg
aaatacagtgattacaatcgttgtttgtacatgcaactccagcgtgtagagatggagctg
aaattactggggccccataaatttcagatgcctcagagttacacacaagctgtctgtcag
gttcagcacatgaagaacctcctgggaacctcaaggtggtcccttgttccaagcttcccc
ggtgatggcaagaaaagtccttcttccaaagggctgccctggtggtttgtgttcattgca
tggttccttgttgcagccaccagtggtgtatctgggttcttcaccatgctctatgggctg
cattatggcaaggagaactccatcaagtggctgatctccatggccatctccttcttggaa
agtcttttcatcacccagcccttaaaggtgctgggatttgctgcattttttgctctggtt
ctgaagaaggtggaacacgaggatgaagaaaacacagctattgatgggcctttgtctgca
ccaggtaactgtctgtatagtgattcaaatcctctctttggagcccgaagggacagcata
agcaatatttaccggccacctcctgcagctgatgtggagaaaatgaaaatcagccgcatg
aaggagcagaaagcatttgccctcatcagagaaatcctggcctatctggggtttttatgg
atgctgttactggttgcctatgggcagagagatcccaattcctactacttaaacaaacac
attgagaacagctttacagatggattccatgatgtctacagttatcaggatttcttcaca
tgggcaaacactaccttagtcaaaaatctttatggatcatataaaggattcattacagat
ggcaattccaagctggtgggtagtgctcgaattcgccaagtaagagtgaaaggagacacc
tgccctatttctcccaaactccagcatgtgattcagaannnnnnnnnnnnnnnnnnnnnn
nnnnnnnnncttcaaacagaagatacatcagattatggggaacgctggaatatttcgatc
tttgataactcctctgacctgagctcagcatggcagtatcagagtcagtcccagctgaaa
gggcaacccatctggggcaaacttgccatctacaggggagggggatacgtgactcacctg
ggaactgatcctacaaatgcctccagaactctccagtaccttttcaacagcgtctggata
gacaccttcacaagagcagtgtttgttgaatttacagtctacaatgccaatgtcaacctg
ttctgcattataagcctgatgtttgaaaccaatgctttaggggccttcttcacaagtgca
gagctgcaaagtgtccggctttacccatacaccaacagtctccatatctttgtggttgca
gcagaagtaatttatttcctctttattgtgtactacatgatagcacagggaaaactgatg
aagactttgagatggagatacttctgcagcaagtggaatctcctcgagatggccattata
ttgattagctggagtgccctgtcagtgtttgtgaagcgggcaatccttgggacgcgagac
atcagctactaccaggaacacaaagaggactgtgtaagctttaatgaaacagcaagagcc
gatgccgttcttggctacctgattgcgttcctagtgcttctctccacagtgaaactgtgg
catctcctgaggctcaaccctaaactaaacatgatcacttccactctaaggagggcatgg
ggagatatctctggattcatcactgttattgcaatcatgttcctcgcctattccattgct
acaaacttgatatttggctggaagctctgctcctacaaaactctctttgattcagcagag
accatggtcagtcttcagctgggaatcttcaactatgaggaggtcttggactacaatcca
attttaggctcgttcttaattggatcctgcataattttcatgacatttgtggtactgaat
ctgttcatttccgtgattctggttgcttttagtgaggagcagaagcactaccaggcttca
gaagaagaggagattgttgatctaatgctgatgaaacttttcagtttcttcgggattaaa
tgcaagaaggaagagaagccattcactgatgatccactgaaatcacctgtcaacgattaa
DBGET
integrated database retrieval system
