Phaethon lepturus (White-tailed tropicbird): 104619804
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Entry
104619804 CDS
T08325
Symbol
PCDH18
Name
(RefSeq) protocadherin-18 isoform X1
KO
K16499
protocadherin delta 2
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plet04515
]
104619804 (PCDH18)
Cell adhesion molecules [BR:
plet04515
]
Cadherins
Protocadherins
104619804 (PCDH18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
PepSY
Syndecan
G1_gp67_N
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
104619804
NCBI-ProteinID:
XP_010284121
LinkDB
All DBs
Position
Unknown
AA seq
1132 aa
AA seq
DB search
MHRIGGKMHFVFIFALMIVSFNKAVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKMPN
PSSVRFRAMQRGNSPLLVVREDNGEISIGAKIDREQLCQKNLNCSIEFDVITLPTEHLQL
FHVEVEVLDINDNSPQFSRALIPIEISESAAVGTRIPLDSAFDPDVGDNSLHTYSLSAND
FFSIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDKGVPQRSGSSLLKISISDSN
DNSPVFERQSYVIQLLENSPIGTLLLDLNATDPDEGANGKVVYSFSSHVSAKIIETFKID
AEKGHLTLLKQVDYEVTKSYEIDAQAQDLGPNSIPAHCKIIIKIVDVNDNRPEINLNLMS
PEKEEVAYISEGSPLDTFVALVRVQDKDSGVNGEIVCKLHGHGHFKLQKTYENNYLILTN
ATLDREKRSEYSLTVIAEDKGTPSLSTVKHFTVQITDENDNPPRFQTNRYEVVILENNSP
GAYITSVTAADPDLGDNGQVTYTILESYILGSSITTYVTIDPSNGAIYALRTFDHEEVNQ
IAFMVQARDGGSQQLVSNTTVVLTIIDENDNAPVIVGPALRNSTAEISIPKDAGIGFLVT
RIRATDRDSGMNSELSCSIAADKENSIFVMDPKTCDISINVSVESVPAKQWEFFVIVQDK
GSPQLSTKALLKCTVFEYVYSFSSTEATLVSQPSLDVSMITIISLGSICAVLLVIMVIFA
TRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTVNGTLPIRSHHRASPSS
SPTLERGQMSSRQSHHSHQSLNSLVTISSNHVPENFALELTHATPAVEQVSQLLSMLHQG
QYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRESPIDRLLGEGF
SDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNVFIPGEEFQPPQPPP
PPAGLEEDPQPADASEKKKSFSTFGKDCQSEEEAGDACTSSLLSEMSSVFQRLLPPSLDA
YAECNETDRSSSLERRKGHLPAKTVNYPQGVAAWAASTHFQNPASNGPALGTHSSAQPSS
KWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQN
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgaatcggcggtaaaatgcactttgtattcatttttgcactgatgatagtatct
ttcaataaggctgtgctgggcaagaatttgaaatacaggatttatgaggagcagagagtt
ggatcagtaattgcaagactgtcggaggatgtagctgatgttttattaaaaatgcctaac
ccttcctcggttcgctttcgagccatgcagagggggaattctcccttgctcgtagtccgt
gaggataatggagaaatcagcataggagctaaaattgaccgggagcaactctgccagaaa
aacttaaactgctccatagagtttgatgtgatcactctgcccaccgagcatctgcagctt
ttccatgttgaagtcgaagtgctggatattaatgacaactctccccagttttccagagct
cttatccccatcgaaatatcggagagcgcagctgtaggaacccggatccctttggacagc
gcttttgacccagatgtgggggacaactcccttcacacttactccctttctgcaaatgat
ttttttagtattgaggtgagaaccaggactgatggtgctaagtatgcagagctgatcgtg
gttagagagctggaccgggagctgaagtcaagttacgagctgcagctcactgcttccgat
aaaggggtgcctcagaggtctggatcatccctcctgaaaataagtatttctgattccaat
gacaacagccctgttttcgagcggcagtcgtacgtgatccaactcttggaaaattcacca
attgggactttgctcctagacctcaatgctactgatccggatgagggcgctaatggtaaa
gtcgtgtactctttcagtagtcatgtgtctgccaaaattatagagacttttaagatagat
gcagaaaaaggacacctgaccctcctgaagcaagtggactacgaagtaaccaaatcctat
gaaattgatgctcaggctcaagatttggggccaaattctattccagctcactgcaaaatt
ataattaaaattgtggatgtgaatgacaacagacccgaaattaacttaaacctgatgtcc
ccagagaaagaagaggtagcttacatttctgaagggtcacccctggacacttttgttgcc
ctggtcagagtacaagacaaggactctggcgtgaatggagagatagtttgcaagctccat
gggcacggccactttaaacttcaaaagacttacgaaaataactatttaatcttgacgaat
gccaccctagatagggaaaagagatctgaatacagcttgactgtaatagcggaggacaag
ggaacgccaagtctctccacagtgaaacactttactgtccaaatcactgatgaaaatgac
aacccaccccgcttccagacaaacagatatgaagttgtaatcttggaaaataactctcca
ggagcgtacatcacatcagtcacagccgcagacccagatctaggcgacaacgggcaggtg
acctacactattttggagagctacattttgggaagttctataaccacctacgtgaccatc
gatccctccaacggggcgatctatgccctgcgaacctttgatcatgaagaagtaaatcaa
attgcctttatggttcaagctagggatggagggagtcagcagcttgttagcaataccacg
gttgtactaaccatcattgatgaaaatgacaacgctcctgtcattgtgggcccagcgcta
cgcaacagcacagcagaaatctcgatccctaaagatgctggaattggctttcttgtcacc
aggataagggctacagatagagactctggtatgaactctgaactcagctgctccatagca
gccgacaaggaaaacagcatctttgtgatggatcccaaaacttgtgacatctctatcaat
gtgagtgttgaatcggttccagcaaaacagtgggagttttttgtgatagtccaggataaa
ggcagtcctcagcttagtactaaagcacttctgaaatgtacagtttttgagtatgtttat
tcattttcaagcacagaagcaactttggtaagccaaccctccctggatgtctccatgata
accattatatccttaggatcaatatgtgccgtgttgctggtcattatggttatctttgct
acaagatgtaatcgagagaagaaggacaccaggtcctacaactgtcgcgtggcggagtcg
acctaccagcaccacccaaaacggccctcgagacagatccacaaaggggacattacatta
gtgccaacggttaatggcactttacccatcagatctcaccacagagcttctccgtcatcg
tctccgaccctggaaaggggacaaatgagcagccggcagagccaccacagccaccaatcg
ctgaacagcctggtgacgatctcctctaaccacgtgcccgaaaattttgcgctggaactc
acccatgcgactccggctgttgagcaggtttctcagcttctctcgatgcttcaccagggc
cagtatcaaccgaggccaagttttcgaggaaacaagtattccagaagctacagatacgcc
ctacaagatatggataaattcagcttgaaagacagtggccggggtgatagtgaagctgga
gacagtgattatgatttggggagagagtctccaattgacagacttcttggggaaggattc
agtgaccttttccttacagatgggagaattcctgcagcgatgcggctgtgcacggaggag
tgcagggtgctggggcactccgaccagtgctggatgccgcccttgccctctccctcctcc
gattacagaagcaacgtgttcatccccggggaggagttccagccgccccagccgccgccg
ccgccggcgggcctcgaggaggatccgcagcccgccgacgccagcgagaagaagaagagc
ttttcgacgttcgggaaagactgccagagcgaggaggaggcgggggacgcctgtacctcc
tctctcctctccgaaatgagcagcgtcttccagcgcctgctgccgccctcgctagacgcc
tacgcggagtgcaatgagacggatcgctccagctcgctggagcgcaggaaggggcatttg
ccagccaagactgtaaattacccgcagggggtggcagcctgggcagccagcacgcacttc
caaaatcctgccagcaacgggcccgctctggggactcactcgagcgcgcagccttcctct
aaatggctgccagccatggaggagatcccggagaattacgaagaagacgattttgacaac
gtgctcaaccacctgagtgatggtaaacacgaactcatggacgccagcgagctggtggca
gaaattaacaagctgctgcaagatgtccggcagaactaa
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