KEGG   Phaethon lepturus (White-tailed tropicbird): 104620177
Entry
104620177         CDS       T08325                                 
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
  KO
K13177  ATP-dependent RNA helicase DDX1 [EC:5.6.2.7]
Organism
plet  Phaethon lepturus (White-tailed tropicbird)
Brite
KEGG Orthology (KO) [BR:plet00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:plet03041]
    104620177 (DDX1)
   03016 Transfer RNA biogenesis [BR:plet03016]
    104620177 (DDX1)
Enzymes [BR:plet01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     104620177 (DDX1)
Spliceosome [BR:plet03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    104620177 (DDX1)
Transfer RNA biogenesis [BR:plet03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    104620177 (DDX1)
SSDB
Motif
Pfam: Helicase_C DEAD CMS1
Other DBs
NCBI-GeneID: 104620177
NCBI-ProteinID: XP_010284615
LinkDB
Position
Unknown
AA seq 421 aa
ELLIIGGVAARDQLSILEQGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLLQG
YSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPE
TVHHVVVPVNPKADKLWERLGKNHIRTDEVHAKDNTRPGANTPEMWSEAIKILKGEYTVR
AIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDRKGHQFSCVCLHGDRKPQERKQNLE
RFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV
AKEKEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLGEIEEHLNCTIAQVEPDIKV
PVDDFDGKVTYGQKRALGGGLYKGHVDILAPTVQELAALEKEAQTSFLHLGYLPNQLFRT
F
NT seq 1267 nt   +upstreamnt  +downstreamnt
ggaactgttgattattggtggggttgctgcaagagatcaactgtccatactggaacaagg
agtggatattgtcgttggaactcctggaagactggatgacctggtctcaacgggaaagct
taatttatctcaagttagattcctggttctggatgaagctgatggccttctcctccaagg
ttattcagacttcataaacaggatccacagtcaaattccccagataacttcagatggaaa
gagacttcaggtgattgtgtgctctgcaacgctacattcttttgatgtgaaaaaactgtc
tgagaagatcatgcattttcccacctgggttgatttgaaaggagaagattctgtccctga
aactgtacaccatgtggttgtgcctgtaaatccaaaagctgacaaactctgggaaaggct
tggcaagaatcatatcagaactgatgaagtgcatgcaaaagacaatacacgacctggcgc
taacactccagaaatgtggtctgaagctattaaaattctaaaaggagaatacactgttcg
ggcaatcaaagaacacaagatggaccaagccattattttctgcaggactaaaatagattg
tgataatatggaacagtacttcatccaacagggcggaggccctgataggaagggacatca
gttctcatgtgtctgtctgcatggtgacagaaaacctcaagaaagaaagcaaaacctgga
aagatttaagagaggagatgtccgtttcctgatctgcacagatgttgctgctagaggaat
tgatattcatggtgttccatacgttatcaacgtcacactccctgatgaaaaacagaacta
cgttcatcgaattgggagagtaggcagagctgagaggatgggtttggcaatctcccttgt
ggcaaaagagaaagaaaaggtttggtatcatgtatgcagtagtcgtgggaaagggtgtta
taatactagactgaaggaagaaggaggttgtaccatatggtacaacgagatgcagttgct
gggggagattgaagaacacttaaactgcactattgcccaagttgaaccagacataaaagt
accagtagatgattttgatgggaaagttacatacgggcagaaaagagcactgggtggtgg
gctgtataaaggccatgtggatattctggcacctacagtacaagagttggctgcccttga
aaaggaggctcagacatctttcttgcatcttggctatcttcctaaccagctgttcagaac
attctga

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