KEGG   Phaethon lepturus (White-tailed tropicbird): 104620339
Entry
104620339         CDS       T08325                                 
Symbol
TRIM42
Name
(RefSeq) tripartite motif-containing protein 42
  KO
K12018  tripartite motif-containing protein 42
Organism
plet  Phaethon lepturus (White-tailed tropicbird)
Brite
KEGG Orthology (KO) [BR:plet00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:plet01009]
    104620339 (TRIM42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:plet04121]
    104620339 (TRIM42)
Protein phosphatases and associated proteins [BR:plet01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     104620339 (TRIM42)
Ubiquitin system [BR:plet04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    104620339 (TRIM42)
SSDB
Motif
Pfam: fn3 zf-B_box AbiGii_2 Pur_ac_phosph_N Ig_J_second Ig_DSCAM-DSCAML_C
Other DBs
NCBI-GeneID: 104620339
NCBI-ProteinID: XP_010284826
LinkDB
Position
Unknown
AA seq 731 aa
MDENGHPCSIWPCSSNCCYLTCHSRKEECCLCWRFLFTSEQNCSCFPCPYEEEKPCQCCH
CSCAEHANCWWCCCSCSTYPGCKSCCCGGENSACQYYESKCCRSSVDEPHHSRTPGTVQS
KDAMSRFRTRNNASVITPERNASSHAFRDQLACPLCKQLFLQPFMLPCNHCICEKCITKS
KTKAEVTENFYIIICPVCSKAHCLPYTNKIQLRKNYLRAKLAKKYMRRHGYLRWRFDHSE
RPVYCETCRERRRVATKRCRTCGINYCNECLHLNHRENGAQDHIFTKAHQEDHEQWRCLL
HSNSNLSEYCLDDHELICGFCKNSLHSDHKTIPLAVACSREAASLFDTIAKFRKVRQGVD
NDLMEVILLKNNFKTYKDTKRKEIRNGFLKLRMVLHEQEKEMMELLENIELKKQKEISEY
INYTSSQLSYMDGLIQYSKEALKEESQVVFLQSAHCLVKEIENAVPFIFQPSPHLREDPL
RKLQLNFDELFSVLQGLVPSLSGIKQSESKAEKYPYSFNPEIMVPRHVSSTYESKQATLF
RSPSLNSLFDLGVLSKDTARRPSSTPPHHSTQSNEVCAYQETACETPRKERKHQIVNFSS
PEPTDNESVPGPVVIYQTVVHSRSAKIYWTCPTEEVDFFEVEFYEVAGIGPDNIAQTQLA
GQLSKIQQQNLEIHNLDANTEYLFKVRAVNASGRGEWSEICKIITSDEYGKIKDRWEKQK
SVQGALPTPNR
NT seq 2196 nt   +upstreamnt  +downstreamnt
atggatgaaaatgggcatccctgttcgatctggccatgcagttccaactgctgttacctg
acttgccacagcagaaaggaagaatgctgcttgtgttggcgcttcttgtttaccagtgag
cagaactgcagctgtttcccatgtccatatgaagaagaaaaaccttgccagtgctgccac
tgctcatgtgcagagcatgcaaattgctggtggtgctgctgctcttgttcaacttaccca
ggctgcaaatcctgctgctgcggtggagagaattcagcttgtcagtattatgaaagcaag
tgctgcagaagctctgtcgatgaaccacatcattcaagaacaccaggaactgttcagtca
aaagatgccatgtcaagatttagaactaggaataatgcatctgtcattacaccagaaagg
aacgcctccagccacgctttccgtgaccagcttgcctgtccactgtgtaagcaattgttt
ctccaaccatttatgctgccgtgcaatcactgcatttgtgagaagtgtataactaaaagc
aagaccaaagctgaagtaactgaaaacttttatattatcatatgcccagtgtgtagcaaa
gcacattgcctcccctacacaaataaaattcagctgaggaagaattacctcagggcaaaa
ctagccaagaaatacatgcgcagacatggctatctgaggtggagatttgaccatagtgaa
agaccagtctactgtgaaacttgcagggagagaagaagagtggcaacgaaaagatgtaga
acatgtggaatcaattattgtaatgaatgtctgcatttaaatcatagagagaatggtgct
caagaccacattttcaccaaagcacatcaagaagatcatgaacagtggcgctgcttactg
cacagcaactcaaacctctctgaatactgtctggatgaccacgaactgatctgtgggttc
tgcaagaactcactgcacagtgatcacaagactattcccttggcagtcgcatgttcaaga
gaggctgcttccctttttgatacaattgcaaaatttagaaaagtacgccaaggagttgat
aatgatctaatggaagttattctgttaaaaaataatttcaagacctataaggacaccaaa
aggaaggagatcagaaatggattcttaaaattacgtatggttcttcatgaacaagaaaag
gagatgatggagttgcttgaaaacattgaacttaaaaaacagaaagaaatttcagaatac
ataaactatacatccagtcagctatcatatatggatggccttattcaatactctaaagag
gctctcaaggaggaaagccaagttgtgtttctgcaatctgcacactgcttagtgaaagaa
atagaaaatgcagttcctttcattttccaacctagtccacatctaagagaagatccctta
agaaaacttcaactcaactttgatgaacttttctctgttttacagggacttgtcccatcc
cttagtggaataaagcagtcagaaagtaaagcagaaaaatatccctattcttttaaccca
gagataatggttccaaggcatgtttcaagtacttacgaatccaagcaagcaacattgttc
cgcagcccatctttaaattccttgtttgacttaggtgtgctgtctaaagacactgccaga
agaccaagctctacacctccccatcattctacacagagtaatgaagtgtgtgcataccag
gaaacagcttgtgaaactccaagaaaagaaagaaaacatcagattgttaacttttcaagt
ccagaacctacagacaatgaatcagtcccaggacctgttgttatataccagactgttgtt
cactcaagatctgccaaaatttactggacttgtcctacagaagaagtggatttctttgag
gtagagttttatgaagttgctggtattggtcctgataacattgcccagacacaactagct
ggccagctaagcaaaatacagcagcagaaccttgagatacataatctggatgcaaataca
gaatatctttttaaagtccgtgctgtcaatgcaagtgggcgaggagaatggagtgagatc
tgtaagataatcacttcagatgaatatgggaaaatcaaagacaggtgggagaagcagaag
agtgttcagggtgctctgccgacaccaaatagataa

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