Phaethon lepturus (White-tailed tropicbird): 104620499
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Entry
104620499 CDS
T08325
Symbol
SMOC1
Name
(RefSeq) SPARC-related modular calcium-binding protein 1
KO
K24354
SPARC-related modular calcium-binding protein
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
plet00536
]
104620499 (SMOC1)
Glycosaminoglycan binding proteins [BR:
plet00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104620499 (SMOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Thyroglobulin_1
Thyroglob_assoc
SPARC_Ca_bdg
Kazal_2
EF-hand_7
EF-hand_6
Kazal_1
CFAI_KAZAL
DUF6233
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
104620499
NCBI-ProteinID:
XP_010285046
LinkDB
All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
FLISDRDRDPQCNLHCSRSQSKPLCASDGRTYESMCDYQRAKCRESSLSVTHRGRCKDAG
QSKCRLERAQALEQAKKPQEAVFIPECNEDGSFTQVQCHTYTGYCWCVTPDGKPISGSSV
QNKTPVCSGSVTDKPSSQGNSGRKDDGSKPTPTMETQPIFDGEEITAPTLWIKHLVIKDS
KLNSSSIRNSEKVHSCDQERQSALEEARQNPREGIVIPECAPGGLYKPVQCHQSTGYCWC
VLVDTGRPLPGTSTRYETPVCESDARSKSTEIDDPFKDRELPGCPEGKKVEFITSLLDAL
TTDMVQAINSAAPTGGGRFSEPDPSHTLEERVVHWYFSQLDNNSSNDINKRELKPFKRYV
KKKAKPKKCARRFTDYCDLNKDKSISLQELKGCLGVSKEGGSLSSFPNGKRQGLNPFIGR
LV
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
tttttaataagtgaccgtgacagagaccctcagtgcaacctacattgctccaggtcccag
tccaaacccctctgtgcctctgacggcagaacgtatgagtcaatgtgtgactaccagaga
gccaaatgccgggagtcaagtctgagtgtgacacatcgcggccggtgcaaagatgctggc
caaagcaaatgtcgattagagagagctcaagcactggaacaggcaaagaagccgcaggaa
gcagtcttcatcccagaatgcaatgaggatggatcattcacacaggtgcagtgccatacc
tacactggatactgctggtgtgtgacacctgatggcaagcctattagcggctcttctgta
cagaacaaaacgcctgtatgttcaggttctgtaactgataaaccatcaagccagggtaat
tctggaaggaaagatgacggttcgaagccaacacctaccatggaaacccagcctattttc
gatggagaagaaatcacagcacccaccctttggattaagcacttggtcatcaaagattcc
aaactgaacagctccagtataaggaattcagagaaagttcactcctgcgaccaggaaaga
cagagcgccctggaggaggccaggcagaacccccgtgagggtatcgtcatccccgagtgc
gctcctggaggcctctacaaaccagtgcaatgccaccagtcgactgggtactgctggtgt
gtcctggtggacacgggacgccccctgcctggtacttccactcgctatgagaccccagtg
tgtgaaagtgatgccagatcgaagagcacagagattgatgatccattcaaggacagagaa
cttccaggctgcccagaaggaaagaaagttgaatttattaccagcttacttgatgctctg
actacggacatggtacaggctattaactcagcggcacctactgggggtgggaggttctcc
gagccagaccccagccacacgctggaggagcgagtagtacactggtacttcagccagctg
gacaacaacagcagcaatgacatcaacaagcgggagctgaagcctttcaagcgttacgta
aagaagaaagccaagcccaagaaatgtgcccgacgtttcactgactactgtgacctcaac
aaggacaagtcaatctcgcttcaggagctgaaggggtgcctgggagtcagcaaggaagga
ggtagcctgagcagtttccccaatggaaaaagacaaggccttaaccctttcataggtcgc
ctggtgtag
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