Phaethon lepturus (White-tailed tropicbird): 104620541
Help
Entry
104620541 CDS
T08325
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1
KO
K06753
roundabout, axon guidance receptor 1
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104620541 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plet04515
]
104620541 (ROBO1)
Cell adhesion molecules [BR:
plet04515
]
Immunoglobulin superfamily
ROBO family
104620541 (ROBO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
FN3_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
Ig_Rha78A_N
Big_4
DUF7908
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
104620541
NCBI-ProteinID:
XP_010285096
LinkDB
All DBs
Position
Unknown
AA seq
1265 aa
AA seq
DB search
LRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGTPLDDKDERITIRGGKLMI
TYTRKNDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARG
DPVPTVRWRKDDGELPKARYEIRDDHTLKIRKVTAGDMGSYTCVAENMVGKAEASATLTV
QVLSEPPQFVVKPRDQVAALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSR
FSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQ
TVAVDGTLVLNCVATGTLMPTILWKKDGILISTQDSRIKQLETGALQIRYAKLGDTGRYT
CIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPN
LNSGATPTSYIIEAFSHASGSSWQTVAENVKTESFAVKGLKPNAIYLFLVRAANAYGLSD
PSQISDPVKTQDVPPTSQGVDHKQVQRELGDVVLHLHNPTILSSSSIEVHWTVDQQSQYI
QGYKILYRPTPASYGESEWLIFEVRTPTKNSVIIPELKKGVNYEIKARPFFNEFQGADSE
VKFAKTLEEAPSAPPQSVSVTKNDGNGTAIVVTWQPPPEDNQNGMVQEYKVWCLGNESRY
HINKTVDGSTFSVVIPSLVPGIRYSVEVAASTGAGPGVKSDPQFIQLDSHGNPVSSEDQV
SLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFT
PTVTYQRGGEAVSSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCTSGNGNSDS
NLTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFV
SQPGQPTPYATTQLIQSNISNNVNNGSGDMNEKHWKPSVQQKQEVAPIQYNIMEQNKLNK
DYRVNDNIAPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKAPKQAGMNWAD
LLPPPPAHPPPHSNSEDYSLSVDENYDQEIPCPVPPARMYLQQDELEEEEEDERGPTPPV
RGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCQEDLGHIQHQPDRRRQPVSPPPPPR
PISPPHTYGYISGPLVSDMDTDAPEEEEDEADIEVAKMQNRRLLLRGLEQTPASSVGDLE
SSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQM
QDAAG
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
ttcttcgggatgacttcagacaaaatccatcagatgtaatggtagctgtgggtgaacctg
cagtgatggaatgtcagcccccaagaggtcacccagaacccactatatcatggaaaaaag
atgggacccctctagatgacaaagatgagagaattacaatcagaggaggaaagcttatga
tcacatacacaagaaagaatgatgctggcaaatatgtttgtgttggaacaaatatggttg
gagaacgtgaaagtgaagttgcggagctcactgttttagagagaccgtcttttgtgaaga
gaccaagtaatttggctgtaactgtggatgatagcgcggagtttaagtgtgaggccagag
gtgacccagtccctacagtaagatggaggaaagatgatggggaattaccgaaagcaagat
atgaaatccgtgatgatcataccttgaaaatccggaaagttacagcaggagacatgggct
catatacgtgtgttgcagaaaatatggttggaaaagctgaagcatcagcaactctaacag
ttcaagttctgtctgagcctccacagtttgttgtaaagcctcgagatcaggtagctgccc
tggggagaacagtgactttccagtgtgaagcaactggaaaccctcagccagccatctttt
ggcggagagagggaagtcagaatctgcttttctcataccagccccctcagtcatccagcc
gattttcagtgtcccaaacaggtgacctcactatcaccaatgtccagagatctgatgttg
ggtactatatctgccagactttaaatgttgcgggaagtatcataacaaaagcctacttgg
aagttactgatgtgattgcagaccggcctccccctgttattcgacagggtcctgtgaatc
agactgtagctgtagatggtactttagtactgaactgcgtggccacaggcactttaatgc
ccactatcctctggaaaaaggatgggatcctcatttccacccaggactctcgcatcaagc
agttggagacaggagcattacagatccgatatgccaagctgggtgacactggtcggtata
cctgcattgcttcaaccccaagtggcgaagctacatggagtgcatacatagaagtccaag
agtttggagtcccagtgcaaccaccaagacccactgacccaaacttgattcctagcgctc
catcaaaacccgaggttacagatgtcagcagaaatacagtaacattgtcgtggcaaccta
atttgaattcaggtgcaacaccaacctcttacataattgaggccttcagccacgcatctg
gtagcagctggcaaactgtagctgaaaatgtgaaaacagagagttttgcagttaaagggc
taaaacctaatgcaatttatctattccttgtgagggcagctaatgcttatgggctaagtg
acccaagccaaatatcggatccagtgaaaactcaagatgttccaccaacaagtcaaggtg
tggatcacaagcaggtccagagagaactaggtgatgtggtactacatctccacaacccta
ccatcctttcttcctcctcaattgaagttcattggactgtggaccagcaatcccagtata
ttcaaggatataaaattctgtaccggcctacgccagcatcctatggagagtcagagtggt
taatctttgaagtgaggactccaaccaaaaacagcgttatcattcccgagctgaagaaag
gtgtaaactacgaaatcaaggctcgccctttttttaatgagtttcagggagcagatagcg
aagtgaaatttgcaaagaccctggaagaagctcctagtgctccacctcagagtgtttcag
taactaagaacgatgggaacgggacagcaattgtggtcacctggcagccgccccccgagg
acaaccagaacgggatggttcaagaatataaggtttggtgtcttggcaatgaaagtcgat
accatataaacaagacggtagatgggtctacgttttctgtagtcatcccctccctagttc
ctggtattcgatatagcgtggaagtggcagcaagtactggggcaggacctggagtgaaaa
gcgatccccagtttatccaattagattctcatggaaaccccgtgtcttcagaagatcaag
tcagtttagcccagcagatatctgatgtagtaaagcagcctgcctttattgctggaattg
gtgcagcctgttggattatccttatggtcttcagcatctggttatatcgccacaggaaga
agcgaaatggactcactagtacttacgctggtatcagaaaagtcccgtcttttaccttca
caccaacagtaacgtatcagagaggaggagaggccgtaagcagtggaggcaggccaggac
tcctaaacatcagtgaaccagccactcagccatggctagcagatacttggcctaacacag
ggaacaatcacaatgactgctccatcaactgctgcacctctggcaatggaaacagtgaca
gcaaccttacgacgtacagtcgaccagccgattgtatagcaaattacaacaatcagctgg
acaacaagcaaacaaacctgatgttgcctgagtcaactgtatatggtgacgtggacctca
gcaacaaaatcaatgagatgaaaaccttcaatagtccaaatctaaaggacggaagatttg
tcagccagcctgggcagcccactccttatgccaccactcaactcatccagtcaaatatca
gcaataatgttaacaatggcagcggggatatgaatgagaaacactggaagccctctgttc
agcaaaagcaagaggttgcacccatacagtacaacattatggagcaaaacaaattaaaca
aagattaccgggtaaatgacaacattgctccaactattccgtacaaccagtcgtatgacc
agaatacaggtggatcctacaacagctcggacagaggcagtagtacatctgggagtcaag
ggcacaagaagggtgctcggaccccaaaggctcccaagcaagctggcatgaactgggcag
atcttcttccaccccctccagcacatccacctccccatagcaatagcgaagattacagtc
tttcagtggacgaaaactatgaccaagaaattccttgtcctgttccacctgcaaggatgt
atctgcagcaggatgaactagaggaagaggaagaagatgagcgaggtcctactccacctg
tccgaggagcagcttcatctccagccgctgtctcctatagccatcagtcaactgccactc
tcaccccctctccccaggaagaactccagcccatgttacaggactgtcaggaggatctgg
gacacatacaacaccaacctgaccggagacgtcaacctgtgagtcctccaccccctccaa
ggcctatctccccaccacatacctatggatatatctcaggccccttggtctctgatatgg
atactgacgcaccagaagaggaagaagatgaggcagatatagaggttgccaagatgcaga
acagaagactccttttgcgtggccttgagcagacacctgcctccagcgttggggatttgg
agagctctgtaacagggtccatgatcaatggctggggctcagcctctgaagaagataaca
tctcaagtgggcggtctagtgttagctcttctgatggatcattttttaccgatgcagatt
ttgcacaggctgttgcagcagctgcggaatacgctggcctgaaggtagccagacgtcaaa
tgcaggatgcagcaggag
DBGET
integrated database retrieval system
