Phaethon lepturus (White-tailed tropicbird): 104620813
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Entry
104620813 CDS
T08325
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104620813 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plet03041
]
104620813 (PRPF38B)
Spliceosome [BR:
plet03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
104620813 (PRPF38B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
104620813
NCBI-ProteinID:
XP_010285431
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
PAASGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHV
EPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPY
IRALGFMYIRYTQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFST
LFPRIPVPVQKTIDQQIKSRPRKIKKDGKEGMEEIDRHAERRRSRSPRRSISPRRSPRRS
RSRSHHREGHGSSSFDRELERERERQRLEREAKEREKERRRSRSTDRTLEWRRSRSRDRY
RSRSRSRDRKGDRRDRDREREKENERSRKKERDYDKERGSEREKDRSRERSKERKSKGDT
EERRHKDEKDEKKHRDDRRDSKKERKHSRSRSRERKHRSRSRSKNTSKRSRSRSKEKSSK
HKNETKEKSNKRSRSRSRGRTDSVEKSRKRDQSPSKEKSRKRSRSKERSHKHDHSDSKDH
SDKHDRRRSQSTERESQEKQHKNKDETV
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
ccggcggcctcaggcaagcagggcaacgtgctgccgctgtgggggaatgagaagaccatg
aacctgaaccccatgatcctcaccaacatcctctcgtcgccctacttcaaggtgcagctc
tatgagctcaagacttaccatgaggtggtggacgagatctatttcaaggttacgcatgtg
gaaccatgggaaaagggaagtcgaaaaacagcaggccagacagggatgtgtggaggggtg
cgtggtgtcggaactggaggaattgtgtctactgccttttgtctgctgtacaaattattt
acgctgaaactcactcgtaagcaagtgatgggccttataactcatacagactctccatat
attagggctcttggatttatgtatattaggtatacacaaccacctacagatctatgggac
tggtttgaatcctttcttgatgatgaagaggacctggatgtgaaggcaggtgggggctgc
gttatgaccatcggggagatgcttcgttccttcctcactaagcttgaatggttttccacg
ctgtttccaagaattcctgtgccagtccagaaaaccattgaccagcaaattaaaagcaga
cctagaaaaatcaagaaagatggcaaggagggaatggaagaaatagaccggcacgcagaa
cgtagacgttcaaggtctccaagacgatccatcagtcccaggaggtctcccagaagatcc
agaagcagaagtcatcatcgggaaggccatggatcatctagttttgatagagaactagaa
agagaaagggaacggcagagattagaacgtgaagctaaagagagagaaaaagaaaggcgg
agatctcgaagtacggatcgcacactagagtggaggcgaagcagaagtagggacagatac
agaagccgtagccgaagtcgtgacaggaaaggagatagaagagacagggatagggagcga
gaaaaagaaaatgaacggagtcggaaaaaagagagagattatgataaggaaagaggtagt
gagagggaaaaagatcgctctagagaaaggtcaaaagaaaggaaaagcaagggtgataca
gaagagagaagacacaaggatgagaaggatgagaagaaacaccgggatgacaggagggat
tccaaaaaagagagaaaacatagtagaagtcgaagccgggaaagaaaacacaggagtagg
agccgaagtaagaatacaagtaagcgcagcagaagcaggagcaaagagaaatcaagtaaa
cataaaaatgaaactaaagagaagtcaaataaacgaagtagaagcagaagcagaggaaga
acagatagtgttgagaagtccagaaaacgagaccagagtcccagcaaagaaaaatctaga
aagcgtagcagaagcaaagaacgttcccacaaacatgatcacagtgatagcaaggaccat
tcggacaaacatgatcgtcgaaggagccaaagtacggaacgagagagccaagaaaagcaa
cacaaaaacaaagatgagactgtgtga
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