Phaethon lepturus (White-tailed tropicbird): 104620870
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Entry
104620870 CDS
T08325
Symbol
TNRC6C
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plet03019
]
104620870 (TNRC6C)
03036 Chromosome and associated proteins [BR:
plet03036
]
104620870 (TNRC6C)
Messenger RNA biogenesis [BR:
plet03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104620870 (TNRC6C)
Chromosome and associated proteins [BR:
plet03036
]
Eukaryotic type
Gene silencing
piRNA pathway
104620870 (TNRC6C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
UBA
RRM_1
UBA_NBR1_C
RRM_occluded
THOC7
Motif
Other DBs
NCBI-GeneID:
104620870
NCBI-ProteinID:
XP_010285515
LinkDB
All DBs
Position
Unknown
AA seq
1682 aa
AA seq
DB search
MVGRLLPSDLSHSGLGDHYENSHWGQQPTFRSEGNCSWDKVIIDRTDKEAWPSITGAETE
SASECTTDTDSASNCGSENSSMATGSAQGNFTGHTKKTNGNNGANGALVQSTSNQSALGA
GGANGNGNSARVWGVAAGSSSGLAHCSASGGDGKMDNMMGDGRSQNCWGASNSNAGINLN
LNPNANPAAWPVLGHEGTVGAGNPSSICSPVSAIGQNMGNQNGNPTGTLGAWGNLLPQES
TEPQTSTSQNVSFSVQPQNLNTDGPNNTNPMNSSPNPINAMQTNGLPNWGMAVGMGAIIP
PHLQGLPGANGTSVSQVSGGSGEGMGSSVWGMSPGNPATGNSNSGFSQGNGDTVNSALSA
KQNGSSSAVQKEGNGASAWDSGPPSGPGVLAWGRGGGNSGVSSMHSGAWGHPNRNASNGV
NGEWGKPPNQHSNSDINGKGSTGWDSSSVTSPNPAMQPGNEQINSWAKAAASGTSASEGS
NDSGGSQNEGSTGREGAGEGRRRDKGMIDQGQVQLPRNDLDPRVLSNTGWGQTPVKQNTA
WEFEESPRSERKNDNGTEAWGCAATQSSNSGGKNDGSIMNSTNTSSVSGWVNSPPAAVPT
NTGWGDSNNKAPNGPGGWGESASSTTVNNAAAAKSGHAWSGTANQEDKSPTWGEPQKPKS
QNWGDGQKSNPSWTSGGGDWTDSSSVPGHMGDGKKNGSGWDSDNRSGSGWNDSARSGTSG
WGNGTNSKANTGTSWGESLKSGPQQNWANKPQDNNVSNWGGAASVKQTGSGWVGGPVPAK
QKENCEATGWEEPSPPSIRRKMEIDDGTSAWGDPNYNNNKTVNMWDRNNPIIQSSTTTNT
TTTSTIINTNMVEPQPSHQSSAQPNRSPLLGPVSSGWGEMPTVHTKTEASWGEPSSPSAA
VDNGTSAWGKPPSSGTGWGDNPAESAGTYGRTNAPAAAPALCKPASKSMQEGWGSGGDDV
NLSTSQWEDEEGDMWNNTASQESSSSCNSWGNAPKKGLQKGMKTSSKQDEAWIMNRLIKQ
LTDMGFPREPAEEALKSNNMNLDQAMSALLEKKVEMDKRGMGVTDYNGMVTKPLGCRPPP
ISKESSMDRPTFLDKDGGLVEEPTTSPFLPSPSLKLPLSNSALPNQTLGGIASGLGMQNL
NSSRQIPSGNLGMFGNSGAAQARTMQQPQQPPVQPLNSSQPSLRAQVPQFLSPQVQAQLL
QFAAKNIGLSPAQLTSPINNPQHMTMLNQLYQLQLAYQRLQIQQQMLQAQRNVSGPMRQQ
EQQVARTINNMQQQIQQHQRQLAQALLMKQQPPPPHLSLHPSAGKSAMDSFSPHPQAPGL
PDLQTKEQQSSPNTFAPYPLAGLNPNMNVNNMDITGGLSVKDTSQSQSRLPQWTHPNSMD
NLSSAASSLDQNSSKHGAIPGGLSIGPPGKSSIDDSYGRYDLIQNSESPASPPVAVPHSW
SRAKTDSDKISNGSSINWPPEFHPGVPWKGLQNIDPENDPDVTPGSVPTGPTINTTIQDV
NRYLLKSGGSSPTSSQNATLPSSSAWPLSASGYSSSFSSIASAPSIAGKLSDIKSTWSSG
PISHTQASLSHELWKVPRNTTAPTRPPPGLTNTKPSSTWGASPLGWTSSYSSGSAWSTDS
SGRTSSWLVLRNLTPQIDGSTLRTLCLQHGPLITFHLNLTQGNAVVRYSSKEEAAKAQKS
LH
NT seq
5048 nt
NT seq
+upstream
nt +downstream
nt
atggttgggcggctccttccttcagatctcagccacagtggattgggagaccattatgag
aattcccactggggacagcagcccactttcaggagtgaaggcaactgcagctgggataaa
gtgataatagacaggactgacaaggaagcgtggccttccattaccggagctgagactgag
tctgcctcagaatgtactacagacactgactctgcctccaactgtggctcagagaacagt
agcatggctacagggagtgcccaaggcaacttcactggacatacaaagaaaactaatggc
aataatggcgccaacggagcactcgtccaaagcacttctaaccagagtgcccttggagct
ggtggagcaaacggtaacggcaactcggccagagtgtggggtgtggctgcgggctccagc
tctggcctagctcactgctctgccagtggtggggatggaaagatggacaacatgatggga
gatggtagaagtcagaactgctggggtgcttccaactcgaatgctggcattaatcttaac
cttaaccctaatgccaatccagctgcctggcctgtacttggacatgaaggaactgtggga
gcaggcaacccttccagtatttgcagtccagtcagtgccataggtcagaacatgggcaac
cagaatgggaacccaacaggcaccttaggtgcttggggaaacttgctgccgcaagagagc
acagaaccacaaacgtccacttctcagaatgtgtctttcagcgtacaacctcagaacctt
aacactgatggaccaaataacactaaccccatgaactcttcaccaaaccctatcaatgca
atgcagacaaacggactgccgaactgggggatggctgttggtatgggggccatcatcccg
ccccacctgcaaggccttcctggtgctaacggaacatcagtttctcaagtcagcgggggc
agtggtgaaggaatgggcagttcagtgtgggggatgtccccaggtaatcctgccacagga
aacagcaattctgggttcagtcaggggaatggagacactgtgaactcagcattaagtgct
aaacaaaatggatccagcagtgctgtgcaaaaggaaggaaacggagcgagcgcgtgggat
tcggggcctccttctggtcctggggtactagcgtggggcaggggcggtggcaacagcggt
gttagtagtatgcattctggagcttggggccaccccaaccgtaacgccagtaacggtgtg
aacggagaatggggcaagcccccaaaccagcattccaatagcgacatcaatgggaaagga
tcaacagggtgggatagctctagtgttaccagcccgaatcctgccatgcaaccgggcaat
gaacaaataaactcttgggccaaagctgcagcatctggcacctcagctagcgaaggaagt
aacgacagcggtggcagtcaaaacgaaggcagtactgggagggagggggctggagagggc
aggaggagagacaaagggatgatagaccaagggcaagttcagttgccaagaaatgacctt
gaccccagggtcctgtccaatacggggtggggacagacccctgtaaagcaaaacactgcc
tgggaatttgaagagtccccacggtctgaacggaagaatgacaatggaacagaggcctgg
ggttgtgcagctactcaatcttcaaactcaggggggaagaacgatgggtccatcatgaac
agtacaaatacctcttcagtatctgggtgggtcaactctccaccggcagctgttccaaca
aatacagggtggggagacagtaacaacaaagcaccaaatggcccagggggatggggagag
tcagcaagctctactactgttaataatgctgctgctgccaaaagcggccacgcttggagt
gggaccgcaaatcaggaggacaaatcgcctacttggggtgaacctcagaaacccaaatct
caaaactggggagatggacagaaatcaaatccaagctggacttcaggaggtggagattgg
acagattcctcatctgttcctggacacatgggtgatgggaagaagaatggatctggatgg
gattctgacaatagatcagggtctggttggaatgattccgcaaggtctgggaccagtggc
tggggaaacggcacaaacagcaaggctaatacaggtacaagttggggggaatctttaaag
tcaggcccccaacaaaattgggctaataaaccccaggacaacaatgtgagtaactgggga
ggagctgcttctgtaaaacagacggggtcagggtgggttggggggccagtgccagccaaa
caaaaagagaactgtgaggcaactggctgggaagagccatctccaccgtccattcgccgc
aagatggaaatcgatgatggtacctcagcttggggcgacccaaattacaacaacaacaag
actgtaaatatgtgggatagaaataatcctataattcagagcagtaccacaaccaatacc
accaccactagcaccattatcaacacaaatatggttgaacctcagccatcgcaccagtca
agtgcccagccgaaccggtccccgctgcttggtccagtctcatcaggctggggagaaatg
cctactgtccacacaaagaccgaagcttcttggggagagccgtcatccccttctgctgca
gttgataatggcacttcagcatgggggaaaccccccagcagtggtacagggtggggagat
aatcctgccgagtcggcagggacatacggaagaacaaatgctccagctgctgccccagcg
ctgtgcaaaccagcttcaaaatctatgcaagaaggctggggcagtggtggggatgatgtg
aatctcagtactagtcagtgggaagatgaagaaggagatatgtggaataatactgcttca
caagagagcagctcctcctgtaattcctgggggaacgccccaaagaaaggacttcaaaag
ggcatgaagacatctagcaagcaagatgaggcctggatcatgaaccgtctgataaaacag
ctcacagacatgggcttccctagagagccagcggaagaggccttgaagagcaacaatatg
aatcttgatcaggccatgagtgctctgctggaaaagaaggtggaaatggacaagcgtgga
atgggagtgaccgactataatggaatggtcacgaaaccccttggctgccgcccaccacca
atctccaaagagtcttccatggaccgccccaccttccttgacaaggatggcggcctagtg
gaagagcccactacttcaccatttttgccttcaccaagcctgaagctccccctttcaaac
agtgcactccctaatcagaccctgggcgggattgcctcagggctgggcatgcaaaacttg
aattcttctagacagataccgagtggcaatctgggtatgtttggcaatagcggagcagca
caagccaggaccatgcaacagccacagcaaccgccagtgcaacctcttaattcatcccag
cctagtcttcgtgctcaagtgcctcagtttctatcccctcaggttcaagcacagcttttg
cagtttgcagcaaaaaacattggtctcagccctgcacagttaacctcgccaattaataat
cctcagcatatgacgatgttgaaccagctctatcagctgcagctggcgtaccaacgttta
caaatccagcagcagatgttacaggctcagcgtaatgtttccggacccatgagacaacag
gagcagcaagttgcacgtacaatcaataacatgcagcagcagatccagcagcaccagcgc
cagctggcccaggccctgcttatgaagcagcagcctccccctccgcatctatctttgcac
ccctctgcaggcaaatcagccatggatagcttttcaccccatccccaggcgcccggccta
cctgacctgcagaccaaagagcaacagtcttcaccgaacacctttgctccttaccctctt
gctggactgaacccgaacatgaatgtaaataacatggacattactggtggtttgtcagtg
aaggacacttctcagtcccaatctcgccttcctcagtggacacaccccaactcaatggat
aatctgtctagtgctgcttcttcgcttgaccagaactccagcaagcacggtgctatacct
ggaggtttaagtattggtcctccgggaaagtcctccattgatgactcttatggccggtat
gatctgattcaaaacagtgaatcgcccgccagtccacccgtagctgttcctcacagctgg
tcacgtgccaaaaccgatagtgataaaatttccaatggctccagcataaactggccacca
gagtttcatccaggagtgccatggaaaggactgcagaatattgatcctgaaaatgacccc
gatgttactcctggaagtgttccaactgggcctaccataaacaccacgatacaggatgtt
aatcgctatcttctcaagagtggagggtcatccccaacatcatctcagaatgccacgctg
ccttcatcgagtgcctggccgcttagtgcctccggctacagtagctctttcagcagcatt
gcatccgcacctagcattgcaggtaaattgtcagacatcaagtctacgtggtcctctggc
ccaatctctcacacacaagcctctctatcccatgaactatggaaggtacccagaaacact
actgctcctacgagaccacctccaggcttaacaaacaccaagccatcgtctacatggggt
gccagtcccctgggttggaccagctcttactcctctggctctgcatggagtactgacagc
tcagggagaacaagcagctggctggttcttcgaaacctcacgccccagattgatggttcc
acactgcggacactgtgtttgcaacatggccctctaataacattccacttgaacctgacg
caagggaatgctgtggtccgatacagttccaaggaagaagcagccaaggcccaaaagtct
ctgcatat
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integrated database retrieval system
