Phaethon lepturus (White-tailed tropicbird): 104621178
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Entry
104621178 CDS
T08325
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plet03036
]
104621178
Enzymes [BR:
plet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
104621178
Chromosome and associated proteins [BR:
plet03036
]
Eukaryotic type
Gene silencing
piRNA pathway
104621178
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
Helicase_C
Helicase_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
104621178
NCBI-ProteinID:
XP_010285899
LinkDB
All DBs
Position
Unknown
AA seq
976 aa
AA seq
DB search
MEVLVLAIEDPGCFWVTMKGCGPYTVDEIEYKNLNAEMNQFYDKSYKDVDEVKPLMVEEG
QICVVFSEELKCWCRAVIKSIMYCTDHYQTECFLVDYAKYIFVKPKDIRVAMEVFMQIPY
RAKKCRLYRTKPVTLRVDFCEDTAKIVPAKRWDSAATRYFQNLLKATTQMKAKLCAVEGN
TFDVFLYVTIKDEKVCVNDDLVSKNFARFEEAKENTGSSADYQENQTSSNVKSLPMKIVN
PAVAFSPVLFQEKVSRNLETGLAVSSSFLEETYQRSSRDLNESTVSIVKAIPGLSCKENA
TVHTDRLQQFLNSDPLKTHIIEDDQQSFQNLNEERNFVFLSNKIEPSSNLETAPLFDDLR
KELTRKKILGPNFTESYCWPPVARGCDVVVISYQGNDPFLYIPPVLTFLQSGSCYKALPN
RNGPLALILCPGWKKAQLVFELLKTYEKCSRQLHPMLIMLGQNKEEARSVKIRGCEVIVT
TPYSLLRLFEHHTLLFCRLCHLVLDEIEVLLSDATEQVFTILDCYKKAMITEEWQYSPHQ
IIAVGTHWNKHIAHLIKEFMNDPYIVITAMEEASIYGNVQQVVQPCLNSERTAVLLKTLE
FTHSNLQKVLVFTSSVNEAEMVHKALKSNSICSLKIHKESEFNLKYILEQWTKKYSSGSH
VVLVLTDDCMQSLGITDATCVIHFGFPSPSIFGQRLHSMSDNFYNDSSVDQEYTKARSVI
LLTENSVCHALWILRYLQRAEAEIPPELHDFTAKPLEAEEDKKFSRPLCAYLKAFGICKN
RTACPDRHQINLQIDVPQNMPDKIIRTPGCVTILPLHIVNATNYFGRIVDKQKDQYTILA
EEINEYFKKPSNKISVKNVEKLAFYGLCEKTLFHRVQVVEISPKEEENLFFSVVIKYIDE
GRTSQVQSYQLLHLPARFQCLPPQAVEFVVCRVKPIDNEIEWNPKVTHYIHHKIKGKLHE
AKVVHTLGNTAWLDPM
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcttggtattagcgattgaagatccaggttgcttttgggttactatgaaagga
tgtgggccttacacagttgatgaaatagagtataaaaacctgaatgccgaaatgaatcag
ttctatgacaaatcttacaaagatgtggatgaagtaaaaccactaatggtagaagaaggc
cagatttgtgtggttttcagtgaggaactcaaatgctggtgtagagcagttattaagtca
atcatgtactgtacagatcattatcaaacagaatgttttcttgtggattatgccaaatac
atttttgttaaaccaaaggacattcgagttgcaatggaagtgtttatgcagatcccatat
agagcaaaaaagtgtagactgtatcgcacaaagccagtgacattgcgtgttgacttttgt
gaagatactgcaaaaatagtaccagccaaaagatgggatagtgctgctactcggtatttt
caaaaccttctcaaagcaactacccaaatgaaagccaagttatgtgctgtagaaggtaac
acatttgatgtttttctgtatgtgacaataaaagatgaaaaggtgtgtgttaatgatgat
cttgtttcaaagaattttgctcgttttgaggaagctaaagagaatacagggagttctgca
gattatcaggagaaccaaacatcatcaaatgttaagtctcttccaatgaaaattgttaat
cctgcggttgctttcagtccagtgctgtttcaggagaaggtatcaagaaatcttgaaaca
ggtcttgctgtttccagttcctttcttgaagagacataccaaaggtcaagcagagatctg
aatgaaagtactgtgtctattgtcaaagcaattccaggtttgtcatgcaaggaaaatgca
acagttcacacagacaggcttcagcagttcttaaattctgatcctctaaagacacacata
attgaagatgaccaacagagttttcaaaaccttaatgaagaaagaaacttcgtctttctt
agcaacaaaattgagccatcatccaatctggaaacagcaccactttttgatgatctgaga
aaggaacttactcggaaaaaaattttaggccctaacttcacagaatcttactgttggccg
ccagtagctcgaggatgtgatgtagttgtcatctcttatcagggaaacgatcctttctta
tatattccgccagtccttacatttttgcagtcaggaagttgctacaaagccttgccaaac
aggaatgggccgctagcacttattttatgtcctgggtggaagaaggcacaacttgttttc
gagctactgaaaacatatgagaaatgttccagacagcttcatccaatgttgataatgctt
gggcagaacaaagaagaagctagaagtgtgaaaatccgaggatgtgaagtaattgtgact
acaccatatagtctcctgagactctttgaacatcataccttattgttttgtagactttgt
catcttgttcttgatgagattgaagtactgctgtctgatgctacagaacaggtttttact
atattagattgttacaagaaagccatgattactgaagagtggcagtattcaccgcatcag
attattgctgttggaactcactggaataaacatatagcacacttgataaaggagttcatg
aatgatccttacattgtgataacagctatggaagaagcttccatctatggaaatgtgcaa
caggttgtgcaaccttgcctgaacagtgagagaactgctgtgttactcaaaacactggag
tttacccacagtaatcttcagaaagtgctggtattcactagctcagtaaatgaagcagaa
atggttcataaggcactgaagagcaactcaatatgttccttgaaaatacataaagagagt
gagtttaatttgaagtatattttagagcagtggacaaaaaagtatagttctggctctcac
gttgtgttagttttaacagatgactgcatgcagtctttgggaattacagatgcaacttgc
gtgatacactttggttttccttctccaagcatctttggtcagcgtctacacagcatgtct
gacaacttctataacgattcttctgtagatcaggaatatacaaaggcaaggtcagtcatt
ctgctaacagaaaacagtgtatgccatgcgctttggatcctgcgttatctgcagcgtgca
gaagctgaaattccaccagagctgcatgattttactgccaagcctctagaagctgaagaa
gataagaaattttcaaggccactgtgtgcctaccttaaagcatttgggatttgcaagaat
agaacagcgtgtccagatcgtcatcaaattaatttacaaatagatgtgccccagaatatg
ccagataaaattatacgaacacctggatgtgtgacaatactgcctctccacattgtaaat
gcaacaaactactttggacgaatagtagataaacaaaaggaccaatatacaattcttgct
gaagaaattaatgagtattttaagaaacctagtaataaaatttctgttaaaaacgtggag
aagctagcgttttatggattatgtgagaaaacactttttcacagggttcaagtggtagag
atttccccaaaagaagaggaaaatttgttctttagtgttgtaattaaatatatagatgaa
ggcagaacaagtcaagttcagagctatcagcttcttcacttacccgcaaggtttcagtgt
ctgccacctcaggctgtggaattcgtagtttgtagagtgaaacccattgataatgaaatt
gaatggaacccaaaggtaactcattacattcatcacaaaattaaaggaaaactacatgaa
gcaaaggtagtacatactttgggaaatacagcttggcttgacccaatg
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