Phaethon lepturus (White-tailed tropicbird): 104621325
Help
Entry
104621325 CDS
T08325
Symbol
CSPG4
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
plet00535
]
104621325 (CSPG4)
04091 Lectins [BR:
plet04091
]
104621325 (CSPG4)
Proteoglycans [BR:
plet00535
]
Cell surface proteoglycans
Others
104621325 (CSPG4)
Lectins [BR:
plet04091
]
C-Type lectins
Others
104621325 (CSPG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
104621325
NCBI-ProteinID:
XP_010286082
LinkDB
All DBs
Position
Unknown
AA seq
1240 aa
AA seq
DB search
ELLVEDGRMTLTIDGLFNSSVDIAGPVRELDIQYGLYAGGTGSLDLPYLAEASSPFRGCL
HLVTFNGLDVLSPLSSDGSSKIFHQVQEGCSTQFSAEPEDPFGFLGPHSYIAFPTWDARE
EATIEFVITTSVTQAPLIYHAGLENDFFYLEISNGRLRGFVEKGNGVIVLHNNVFISDEQ
QHYVKVYTDIHKFEILIDYYASSTSNRGINNYLDLQGNLFIGGMNEKALQRLREHHLAFI
SVWTMTNNSFVGCLEDLRINLQRRSLQDAVITKDITSGCGKQEHYWDYDEVYEQDEAPTS
PPPDVWSGAPGLVVEPCRPDNSFPPAFANISRLLHVSPLIVSEGGTAYLEWKHTQPTVDL
SLANIRQSQILFSITNDPRHGQLELDIPGSRSRRKFTLLDIVNRKVRYVHDGSEGPMDQL
MLEVTVTAQQGVPECLRQGQMYLLPIMINPINDAPQVIFPDGNHMTILKHTRKHLTTDIL
QVLDDDTSCDDLEFQLHGGQQMEEGYVEYDFHPGVPIEEFSCRDLETGNVVYVHQSGTNL
QLTLQVSDGTVPSPTATLRILAIDPDIHLRNNTGLSIAQGGAARITTANLSVETNAVKQR
VAILYVLTEPLRYGEVQKQGSMGGEWKKVESFHQQDLEQGRIQYFSTDSEHRLEDVMERL
RFKVQVGQKVLQNNTFLIRIKRATIKMRTMVPLQMKNKRHRNITSKELEAMLEDPNSAPV
PFHYLIIQAPKKGNLELLGNRLTEGFGFTQDDLQRNHLSYSATIRNSQQAEDTFQFRVHA
GEQHSPIYTYTISIGGDPDAPALTNVLLTVPEGGQAVISKDHLFVQSMNSMDYLYEVIEG
PAHGRLAWAASPSWASREEIMEFTNDDILHHRLLYQHDDSETLEDDIPFVAIRQGEGSAE
PDAEEVRGVFRVSIQPVNDHTPVQVVNKVFNVVRNGQHLLTTDDIAFADEDSGFSDTQLV
LARKDILFGSIVSVDDRSHQVYRFTQDDLRKKKILFVHSGADRGWIQLQVSDGLHQTTAL
LEVQASDPYIKIVNNTGLVIHQGSRGSIDSSVLSLETNMDIRSDEEIRFLITTPPRWGTV
LRGEQPVVAFSQRDLLAGEISYRHNGSRNTRDELQFTVEANEVVVEDTLAISVFLETHPS
PLRIVNHKEIRVFQGEAAGIKEESLLVAHEEILPQDIVYLVSSPPASGFLAMLQHGRDLN
EQPSLDPIQSFTQEDINEGRVLYLHSKPEEEHDQFVVDIT
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
gagctgctggtggaagacggcagaatgacgctgaccatcgacggcctcttcaacagctct
gtggacatcgcagggcccgtacgggagctggacatccagtacggcctctatgccggtggg
acaggcagccttgacctgccctacctcgccgaggccagctcacccttcagaggttgcctc
cacttagtgacgttcaacggcctggatgtcctctcccctctgtcctccgacggcagctcc
aagatcttccaccaggtccaggaagggtgcagcacgcagttctctgcggaacccgaggac
cccttcgggttcctggggccacactcctacatcgcgtttcccacgtgggatgccagggag
gaggcaaccattgagtttgtgataacgacgagcgtcacccaggcacccctcatctatcac
gcagggctggagaatgacttcttctacctggagatctccaacgggcgcctgagagggttt
gttgagaaggggaacggcgtcatcgtcctgcacaacaatgtcttcatcagcgatgagcag
cagcactatgtcaaagtctacacagacatccacaagtttgagatactgatagattactac
gcctcatccacgtccaaccggggcatcaacaactacctggaccttcagggaaacctcttc
atcggaggtatgaacgaaaaagctctgcagaggctgagagagcatcatctggctttcatc
tcggtgtggaccatgaccaacaactcgtttgttggttgcctggaggacctgcggataaac
ctgcagaggaggagtctgcaggatgccgtgatcacgaaggacatcacatcaggctgtgga
aagcaggagcactactgggactacgacgaggtgtacgagcaggacgaggcacccacctcc
ccacctccagatgtctggtcaggggcaccgggcctggtggtggaaccgtgccggccagac
aatagcttcccacccgccttcgccaacatcagcaggctgctgcacgtcagccccctcatc
gtctctgaagggggcacggcctatctggagtggaaacacacccagccaacggtagacttg
agtcttgcaaacatccggcagtcccaaatcctctttagcatcaccaacgatcctaggcac
ggccagctggagctggacattcctgggtccaggagcagaaggaagttcaccttgttggac
attgtgaataggaaagtcaggtatgtccacgacggctccgaggggcccatggaccagctg
atgctggaggtgacggtaactgcccagcaaggggtccccgagtgcttgcggcaggggcag
atgtacctgctgcccatcatgatcaaccccatcaacgatgccccacaagtgatctttccc
gatgggaaccacatgacaatcctgaagcacacacggaagcacctgaccacagacatcctg
caggtcctagatgatgacacgtcctgtgatgacctcgaattccagctgcatggtggccag
cagatggaggagggttatgtagagtatgacttccaccctggagtgcccattgaggagttc
tcctgcagggacctggaaacaggcaacgtagtctacgtgcaccaaagcgggacaaactta
caactcaccttgcaggtgagcgacggcacagtcccaagccccactgccaccctgagaatc
ctcgccattgaccctgacatccacctgcgcaacaacaccggcctctccatcgcccaagga
ggggctgcgcgcattaccacagccaacctgtcagtggagacgaatgccgtgaaacaacgg
gttgccatcctgtatgtcctcacagagcccctaaggtatggtgaggtccagaagcaaggg
agcatgggaggggaatggaaaaaagtcgagtccttccaccagcaagacttggagcaaggg
cgcatccagtatttcagcacggactcggagcaccggctggaagatgtcatggagaggctg
agattcaaagtccaggtggggcagaaagtcttgcaaaacaacacctttctcataaggatt
aaaagagccaccattaagatgaggaccatggtccccctccagatgaagaacaagcggcac
agaaacatcaccagtaaggagctggaggcaatgttggaagacccaaactctgccccggtc
cctttccactacctgataatccaggctcccaaaaagggaaacttggagctgctcggcaac
aggctgaccgaaggctttggatttacccaggacgacctgcaaagaaaccacctgagctac
agcgcgaccatcaggaactctcagcaagccgaggacaccttccagtttcgtgtccacgcc
ggcgagcagcactctcccatctacacctacacaatcagcattggcggggaccccgacgca
ccagccctgaccaacgtcctcctgaccgtgccagaaggggggcaagctgtcatctccaag
gaccacttgtttgtacagagcatgaacagcatggactacctctacgaagtgattgagggg
ccagcacacgggaggctggcctgggctgcgtcccccagctgggcctccagagaggagatc
atggagttcaccaacgatgatatcctccaccaccggctgctgtaccagcacgatgactcc
gagacactggaggatgacatccccttcgtagcgatcaggcaaggtgaggggagcgctgag
cccgatgcggaggaggtaagaggtgttttcagggtctccatccaacccgtcaatgaccac
accccagtccaagtggtgaacaaggtcttcaacgtggtgcgcaatgggcagcacctgctg
acgacagacgacatcgccttcgccgacgaggactctggcttctctgacacgcagctggtg
ctggcgaggaaggacattttgtttggcagcatcgtgtctgtcgatgacagaagccatcag
gtctatcggttcacgcaggatgacctgaggaagaagaagatcctttttgtccattcaggg
gctgaccgggggtggatccagctacaggtctcagatggcctccaccaaaccacggccctc
ctggaagtacaggcgtcagatccctacatcaaaatagtcaacaacaccggtctagtcatc
caccaggggagccgagggagcatcgactcttctgtcctcagcctggagaccaacatggac
atcaggtcagatgaagagatacggttcctgataacgacccccccaaggtgggggactgtg
ctgagaggggagcagccggtcgtggccttctcccagagggacctgctagcaggggagatc
tcctaccgccacaacgggagcaggaacacccgggatgagctccagttcactgtagaagca
aacgaggtggtggtggaggacacgctggccatcagcgtgttcttggaaacccatcccagc
cccctgcgtatagtcaaccacaaggagatacgtgtcttccagggggaagcagctgggatc
aaggaagagtccctactggtggcccacgaagagatccttccccaggacatagtctacctg
gtgagcagccccccagcctccggcttcctggcaatgcttcagcatggccgagacttgaac
gagcagcccagcctggaccccatccagtccttcacccaggaggacatcaacgaaggcaga
gtcctctacctccactccaagccagaggaggagcacgaccagtttgtcgtagacatcacg
DBGET
integrated database retrieval system
