Phaethon lepturus (White-tailed tropicbird): 104621998
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Entry
104621998 CDS
T08325
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
plet01002
]
104621998 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plet04121
]
104621998 (USP42)
Enzymes [BR:
plet01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104621998 (USP42)
Peptidases and inhibitors [BR:
plet01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104621998 (USP42)
Ubiquitin system [BR:
plet04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104621998 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
104621998
NCBI-ProteinID:
XP_010286949
LinkDB
All DBs
Position
Unknown
AA seq
1339 aa
AA seq
DB search
MTIVNKPKSSKSKKSSSRRSDKSKKPRTKKMTSRTANLGRVPPAEDPNKVSVEKGPGGAI
YCRSSQKSKPFAQRDLVVNDGIAPPQRILFPPEKICMDWQQTQSVGVGLQNLGNTCFLNS
TLQCLTYTPPLANYMLSLEHTQSCHEEGFCMMCTMETHINQVLCCSNNAIKPTSVINGLK
RIGKHFHFGSQEDAHEFLCFTVDALQKACLNGSTKLDRSSQATTLIYQIFGGYLRSRVKC
LNCKAVSDTYEPFLDITLDIKAVTSVTRALEQFVKPEQLDGENSYKCSKCKKMVPASKRY
TIHRSSNVLTISLKRFANFTGGKINKDVKYPEYLDLRAYMSQSIGEPLIYALYAVLVHSG
FNCNAGHYLCFIKAGNGLWYRMNDASVDLSDIKTVLNQQAYVLFYIRRYDLTLGERAFYL
PAPSYPRSFLGQRGANSKQAGFMGPRLPPHMIKNSSRLNGNGPLKEDANTVGVTVKRPSS
APPTACVQNWAITRPSITDPSKNQKITISIHNKLPACQTVSQLDCLSSAAEDEDLSKPVP
SSTITNSSAAESTSNASTMSVATTVSKQEVPDEIFVEPAVNGNPRLGSDNAVPYGAESSG
KSEESKGLFKRNCNIITSNGILIGKVVRTLQNSHSSCQNAEEERSQHELPKNDSLNGAIS
LDNESKENGLKLDDSTCQVQPVKPSEIFFSKTNGLLETMPIAMSPVPQEIILESLTYSQL
NSLSEEISVPGPQKSSENDALMENVVMEALFAYEESRKVPSNFSCEVENLYTQSGSETIS
TKEEVAESIITKADNAHPNINGQHKVRKKSMDTEDEFLGQCESEDSRDKDKPRRSKEPEL
ISKENPLYIKGSPESEEKLGQASSIKSDIECSSKKLASLDITDKCQDTKDISNNYVEVPP
VNDSSITKLDKVLESQFSRENEGLSNKKCEDDKHRKKYKKKIHETKKTDKEHYRKKRENS
DTEEREKEKQTRSKTDDHSHKRRCSRSVETNKQNRHKQEYCNESRYRSSHNERNSPNNGK
SSGKYSRYRSRSRERTEQDRNRYYHSKGERTWSRERYYQDEPRRWEKCRYYNDYYSSYGT
RDGRERKSSHCDKDFDKSSQAYNNRSHKDYHCKSRWPHNAPSREDDVHHFSSHRANLHHC
SVPQQQSEKYPRERHALPPVSAHSNFEDSSWENEKIRNGKRKYTHTEGIGSGSEIEKKCR
KIGDQRMKKYKKVKKKKKSKDKHREKDYKLYDLDFSVLRFDNDNRKHKKKKKKKKHIRKL
KDFLEYLDPHFQKKTREKKEESCPPGGYLCEQYRNQGSKEPYKEGKPSSAGESKKYSSLT
SNEYVKDAELTDGSLQYSN
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttaacaagccaaaatcttcaaaatctaaaaaatcgtcatcaaggcggtct
gacaaatctaagaaaccccgtactaaaaaaatgacatcacgcaccgcaaatttgggccgg
gtaccacctgcagaagatccaaacaaagtctctgtggaaaaaggacctggaggtgctatt
tattgtagatcatctcaaaaatctaagccttttgcccaaagagatctagttgttaatgat
ggaattgccccgccacaaaggattctttttccacctgagaaaatatgtatggattggcaa
caaacacaaagtgttggagttggactgcagaatctcggcaacacatgtttccttaattct
actcttcagtgtttgacctacacacctcctctcgccaattacatgctttctcttgaacac
acccagtcatgtcatgaagaaggcttttgtatgatgtgcacaatggaaactcacattaac
caggtcctgtgttgctctaataatgccatcaaacctacatctgttatcaatggccttaaa
agaataggaaaacatttccattttggcagtcaagaggatgcacatgaattcttatgcttc
actgttgatgctttgcagaaagcttgcttaaatggaagcaccaaattggacagatcttct
caagccaccacacttatttatcaaatatttggaggatatctaagatcccgagtaaagtgc
ttgaactgcaaagctgtttcggatacgtatgaaccattcctcgatattactttggatata
aaggcagttacatctgtcaccagagctctagaacaatttgtgaaaccggaacaactggat
ggtgaaaatagctataagtgtagcaagtgtaaaaagatggttcctgcgtcaaagaggtat
acgatacatcgttcttccaacgttctcacaatatctctgaaaagatttgcgaactttaca
ggtggaaagatcaacaaggatgtaaaatatcctgaatatttggatcttcgagcctatatg
tcccaatcaattggagaaccactcatctatgctttatatgcagttcttgtacatagtggt
ttcaactgtaacgcaggacactatctctgcttcataaaggccggtaatggactttggtat
cgaatgaatgatgcctcagtagacctttctgatatcaaaacagttctcaatcagcaagct
tatgtacttttttatatcaggcgctatgatttgacacttggagaacgtgctttttactta
ccagcaccgtcttacccccgttcattccttggtcagcggggagctaatagtaagcaggct
ggatttatgggaccacgacttcctcctcatatgattaagaattcaagtcgtttaaatgga
aatggacccctaaaagaggatgcaaataccgttggtgtgaccgtaaaaaggccgtcttca
gctccaccaacagcttgtgttcaaaattgggcaattaccaggccttcaattaccgatcca
tcaaaaaaccagaagatcactatcagtattcataacaaattgcctgcatgtcagactgtg
tcgcaacttgactgtcttagcagtgctgcggaggatgaggatctaagcaagcctgttcct
tcatccacaattacaaattcttctgcagcagagtctacctcaaatgcgtctacaatgtca
gttgctactaccgtttccaaacaggaagttcctgatgaaatttttgttgagccagcagtg
aatggaaatcccagactcggctctgataacgcagtcccttacggtgcagaatcttcagga
aaatctgaggagtcgaagggcttgtttaaaaggaattgcaacataataacttctaatgga
attttgattggaaaggtggtccgtacattgcagaactcccattcttcctgtcagaatgct
gaagaagaaagatcccaacacgagctgccaaaaaatgattcactaaatggtgctattagt
ttagataatgaatctaaagaaaatggactgaaacttgatgattccacttgccaagtccaa
cctgttaaaccttctgagattttcttttctaaaacaaatggattgcttgaaacaatgcct
atagctatgtcgccggttcctcaagaaatcatcttagaatctctcacatacagccagtta
aacagcttgtcagaggaaataagtgtccctggacctcagaaatcttctgagaatgatgct
cttatggaaaatgtagtgatggaagcactgtttgcctatgaagaatccaggaaggttcct
tccaactttagctgtgaggttgagaatctttatactcaatcaggttctgaaaccatttct
accaaagaagaagttgctgaaagtattataacaaaagctgataatgcacatcccaatatc
aatggtcagcacaaggtcaggaaaaaatccatggacactgaagacgaattccttgggcag
tgcgagtctgaagatagtagagacaaagacaaaccaagaagatcaaaagaacctgaactc
atttcaaaagaaaatcctttgtacatcaaagggtctcctgagagcgaagagaaattaggg
caagcttcctctataaagtctgacattgaatgtagttctaaaaaacttgcatcgctagat
attacagataaatgccaagatacaaaggacatttctaataactatgtagaggtaccacct
gttaatgactcttctatcacgaagctggataaagttttggagagccaattttctagagaa
aacgagggattgagtaataaaaaatgtgaggatgataaacataggaaaaaatataagaaa
aaaatacacgagactaaaaaaactgacaaagagcactaccgaaagaagagagagaactca
gacactgaggagagggagaaggaaaagcaaaccagaagcaaaacagatgatcattcccac
aagaggaggtgctctcgcagtgtggaaacaaataagcaaaatcgtcataaacaggaatat
tgcaatgaaagcaggtacagatcttcccataatgaaagaaacagtccaaataatggcaaa
agctcaggaaaatattctcgctacagatcccgaagcagagaaagaacagaacaagacagg
aataggtattatcattccaaaggagagagaacttggagcagagaaagatactatcaagat
gaaccacggcgatgggaaaaatgcagatactacaatgattattattcctcttacggaaca
agagatggtagagagagaaagtcctctcattgtgataaagactttgacaaatcgagtcaa
gcttacaacaacagatcacataaggattatcattgcaaaagcagatggcctcacaatgca
ccctctagagaagacgatgtacatcactttagcagccacagagcaaacttgcatcattgt
tcagtacctcagcagcaatctgaaaaatatcctcgtgaaaggcatgcgcttccacctgtg
tcagctcattccaatttcgaggactcttcctgggaaaatgaaaaaataagaaatggtaaa
agaaaatacacccacacagaaggaattggaagcggaagcgaaatagaaaagaaatgtcga
aagataggtgaccaaagaatgaaaaaatacaagaaggtcaagaagaaaaagaagtccaaa
gataaacatcgagagaaggattacaaactttatgatttggatttctctgtgctccgcttt
gacaatgacaatcgcaaacataagaaaaagaagaaaaagaagaaacacatcaggaaactg
aaagacttcttggaatatttagatcctcatttccagaagaaaacacgggagaagaaggaa
gaatcctgtcctccaggcggctatttatgtgagcaatacagaaaccagggcagtaaagaa
ccctacaaggaagggaagccttccagtgcgggtgaaagcaagaaatacagctccctcaca
tccaatgagtatgtgaaagatgcggagcttactgatggaagccttcagtactcaaactaa
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integrated database retrieval system
