Phaethon lepturus (White-tailed tropicbird): 104622054
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Entry
104622054 CDS
T08325
Symbol
ZC3H12C
Name
(RefSeq) probable ribonuclease ZC3H12C isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plet03019
]
104622054 (ZC3H12C)
Messenger RNA biogenesis [BR:
plet03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
104622054 (ZC3H12C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
UBA_N4BP1_C
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
104622054
NCBI-ProteinID:
XP_010287012
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MSVCFPANEYGTLYIQEYKKNSKVESSTCSSFMGLKDHLGHDLGHLYAESTGTQINAIVP
WSMAEKPTMDKVNSRKEDVDKEASEETSGSSSCDSEESTNSDNDSERLNNSASESHLLPK
THRQLCRSPCLEPHILKRNEILQDFRIEEAQIVPKEVKKPPDVVKEYQTKLEFALKLGYS
EEQVQLVLNKLGTDALINDILGELVKLGNKTETDQTVANTNTSVIREASSIESQRSESPL
QEDVTEDGDNLRPIVIDGSNVAMSHGNKEVFSCRGIKLAVDWFLERGHKDVTVFVPAWRK
EQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFESDGIIVSND
NYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPIVPEHKKQ
PCPYGKKCTYGHKCKYYHPERGNQPQRSVADELRAMSRSTAAKTTSEGGLVKSNSVPCST
KNDGTSELKRAAPKRQSDPSIRTQVYQDLEEKLPTKNKLETRSVPSLVSIPSSSAAKPQS
TAPLTNGLPSGVHFPPQDQRPQGQYPTVMMATKNHGTPMPYDQYPKCESPVDVGYYSMLS
AYSNLSMSGPRSPERRFSLDTDYRISSVASDCSSEGSISCGSSDSYVGYSDRSYMSSPDP
QLEENLKCQHMHPHGRLNTQPFLQSYHEPLTRVQSYSHEEPKHHHKPPIPYMAVHLQHPT
VGARSSCPNDYSTSQSSSHSKTMHLGRALVSTRIDSISDSHLYDSSPLRHRKPYSGQDGL
GSWDRQSYGMDAYGYRQTYSLPSNPTQPCYEQFAFQSLPEQQDQTWRVPYCGIPQDPPRH
QGTREKVYINLCNIFPPDLVRIVMKKNPHVTDAQQLAAAILVEKSQLGY
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgtgttttccagcgaacgaatacggaacactttatattcaggaatacaagaaa
aacagcaaagtggagtcaagtacatgcagcagcttcatgggcttgaaggatcatctgggg
catgacttaggccacctttatgcggagagcactggcacacaaataaatgcaattgtacct
tggtcaatggcggagaagccaacaatggataaggtgaattctaggaaagaagatgtagac
aaggaggcatctgaagagacttctggaagctccagctgtgactctgaagaaagcacaaat
tctgataatgattcagagagactgaataattctgcatcagaatcacatttattgcctaag
actcaccgacagctgtgccgttctccttgcttagagcctcatatactaaaaagaaatgaa
atcttgcaagactttaggatagaagaggctcagatagtacctaaggaagtcaaaaagccc
cctgatgtggtgaaagaatatcaaaccaaactggagtttgcacttaagttgggttactct
gaagagcaggttcaacttgtactaaataaacttggtactgatgctttaataaatgatatt
ttgggagaacttgtcaaacttgggaataaaactgagactgatcagactgtagctaatact
aacactagtgtaatacgtgaagcgtcttccatagagtctcagaggtcagagtctccactg
caggaggatgtgacagaggatggtgacaacctgaggccaatagttattgatggcagcaat
gttgcaatgagccacgggaacaaagaagtattttcttgtcgaggaatcaaactggcggta
gactggtttttggagagaggccacaaggatgttacagtgtttgtgccagcatggaggaaa
gaacagtcaagacctgatgcccttatcacagatcaagaaatcttgcgtaaattagaaaag
gagaagattcttgtgttcacaccatcccgccgagtgcaagggagaagggtggtatgctac
gatgaccgatttatagtgaagttggcctttgagtcagatggcatcattgtttctaatgat
aactacagggatctagctaatgaaaaacctgaatggaagaagttcatagatgaacgcttg
ctgatgtattcatttgttaatgacaaatttatgcctcctgatgatcctcttggccgccat
ggtccaagtctggacaattttcttaggaagaagcctattgtgccagagcataagaagcaa
ccatgtccatatggcaagaaatgtacctatggacacaaatgcaaatactatcatccagaa
agaggaaatcagcctcagcgatctgtagctgatgaacttcgtgccatgtctagaagcaca
gctgccaaaactacaagtgaaggaggactggtaaaaagcaatagcgttccctgtagcact
aaaaatgatggcacttctgagctgaagcgtgctgctccaaagaggcaatcagatcctagt
ataaggactcaagtctatcaagacttggaggaaaagcttcccaccaaaaacaagttggaa
accaggtctgtaccttctttagttagtataccaagttcctctgctgcaaaaccccaaagt
actgcacctttaactaacggccttccatccggagttcactttccacctcaggatcaaaga
ccacagggacagtatcctacagtgatgatggcaaccaaaaatcacggaacaccaatgcct
tatgaccagtatccaaaatgtgagtctcctgtggatgtagggtattactctatgctgagt
gcatattcaaatctaagtatgtctggtccacgtagtcccgaaaggcgcttctccttggac
acagattataggataagctctgtagcctctgactgcagcagtgaagggagcattagctgt
ggcagtagtgattcctatgtgggttacagtgatcgctcttacatgagttcgcctgaccca
cagctagaagagaacttgaagtgccaacatatgcaccctcatggccgccttaacactcag
cccttcctacagagctaccacgagcctctcacacgagtgcaaagctatagtcatgaagaa
ccaaagcatcaccacaaacctccaattccatacatggctgtgcatctacagcatccaaca
gtcggtgctcgatccagttgtccgaacgactactcgacatctcagagttcatcgcattca
aagaccatgcatctggggagagcccttgtgtccacgagaatagacagcatttcagactca
catttatatgatagttctccattaagacacagaaagccttattctggccaggatgggctt
ggaagttgggaccggcagagttacgggatggatgcgtatggctaccgccagacctactcc
ttgccaagtaaccctacacagccgtgttacgagcagtttgccttccaaagcttacctgaa
cagcaggaccagacttggcgcgtaccttactgtggaatccctcaagaccctccaaggcac
caaggcacccgggagaaggtttacataaatctctgcaacatcttcccccctgatcttgtg
aggattgttatgaagaagaaccctcacgtgacggacgctcagcagctcgctgcagccatc
ttagtggaaaaatctcagctaggttattga
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