Phaethon lepturus (White-tailed tropicbird): 104622388
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Entry
104622388 CDS
T08325
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet04142
Lysosome biogenesis
plet04144
Endocytosis
plet05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104622388 (CLTC)
04142 Lysosome biogenesis
104622388 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
104622388 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plet04131
]
104622388 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plet04147
]
104622388 (CLTC)
Membrane trafficking [BR:
plet04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
104622388 (CLTC)
Exosome [BR:
plet04147
]
Exosomal proteins
Proteins found in most exosomes
104622388 (CLTC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
NEW1_HB
Ig_TRAPPC10_3rd
Motif
Other DBs
NCBI-GeneID:
104622388
NCBI-ProteinID:
XP_010287448
LinkDB
All DBs
Position
Unknown
AA seq
1651 aa
AA seq
DB search
MESDKFICIREKVGEQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKAGKTLQIF
NIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGC
QIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAE
ESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISDKHD
VVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAQHEATAGIIGVNRKGQVLSVCVEE
ENIIPYITNVLQNPDLALRMAVRNNLAGAEELFARKFNALFAQGNYSEAAKVAANAPKGI
LRTPDTIRRFQSVPAQPGQTSPLLQYFGILLDQGQLNKYESLELCRPVLQQGRKQLLEKW
LKEDKLECSEELGDLVKSVDPTLALSVYLRANVPNKVIQCFAETGQVQKIVLYAKKVGYT
PDWIFLLRNVMRISPDQGQQFAQMLVQDEEPLADITQIVDVFMEYNLIQQCTAFLLDALK
NNRPSEGPLQTRLLEMNLMHAPQVADAILGNQMFTHYDRAHIAQLCEKAGLLQRALEHFT
DLYDIKRAVVHTHLLNPEWLVNYFGSLSVEDSLECLRAMLSANIRQNLQICVQVASKYHE
QLSTQSLIELFESFKSFEGLFYFLGSIVNFSQDPDVHFKYIQAACKTGQIKEVERICRES
NCYDPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSR
LPVVIGGLLDVDCSEDVIKNLILVVRGQFSTDELVAEVEKRNRLKLLLPWLEARIHEGCE
EPATHNALAKIYIDSNNNPERFLRENPYYDSRVVGKYCEKRDPHLACVAYERGQCDLELI
NVCNENSLFKSLSRYLVRRKDPELWASVLLESNPYRRPLIDQVVQTALSETQDPEEVSVT
VKAFMTADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYD
APDIANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQL
AKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAANASGNWEELVKYLQMARKKARESYVET
ELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYEAAKLLYNNVSNFGRLASTL
VHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQ
DRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRA
AEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIITKVANVELYYKAVQFY
LEFKPLLLNDLLMVLSPRLDHTRAVTFFTKVKQLPLVKPYLRSVQNHNNKSVNESLNNLF
IIEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKD
RLYKDAMQYASESKDTELAEELLQWFLQENKRECFGACLFTCYDLLRPDVVLETAWRHNI
MDFAMPYFIQVMKEYLTKVDAIKEKVDKLDASESLRKEEEQATETQPIVYGQPQLMLTAG
PSVAVPPQAPFGYGYTAPPYGQPQPGFGYSM
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgataaattcatctgtataagagagaaagtaggagaacaggctcaagtggtg
atcattgacatgaatgaccccagcaaccctattcgaagaccaatttcagccgacagtgct
atcatgaaccctgccagtaaagtcattgcattaaaagctggaaagacgcttcaaatattt
aacattgaaatgaagagcaaaatgaaggctcatacaatgacagatgatgtcaccttctgg
aagtggatctctttgaatactgttgcccttgtaacggataatgcagtctaccattggagt
atggagggggagtcccagcctgtgaaaatgtttgatcgccattctagtcttgctggctgc
cagatcatcaactaccgtactgacgctaagcagaagtggctgctgctaactggcatatct
gcacagcaaaatcgtgttgtgggagcaatgcagctatattctgtagatagaaaagtgtca
caaccaattgagggacatgcagctagctttgcacagttcaagatggaaggaaatgctgaa
gaatctactctcttctgttttgcagtaagagggcaagctgggggtaagttgcatatcatt
gaagttggcacaccacctactgggaatcagccatttccaaagaaagcagtggatgtcttc
tttcctcctgaagcacaaaatgactttcctgttgccatgcagatcagtgacaagcatgat
gtggtgtttctcataacaaaatatggctatatccacttatatgacctggaaactggcacc
tgtatctacatgaacagaatcagtggagagacaatatttgttactgcacagcatgaagca
acagctggaattattggagtaaacagaaagggacaagtgctctcagtgtgtgtggaagaa
gagaatattattccctatatcacaaatgtgctgcagaatcctgacctagctttacgaatg
gctgtccgcaacaacctggcaggtgctgaggaactctttgccagaaaattcaatgcattg
tttgcacaagggaactattcagaggcagcaaaagtggcagctaatgctccaaagggaatc
ctgcgtactccagacaccatacgccggttccagagtgttccagcgcagccaggacagact
tcccctttactccaatactttggcattctgcttgatcaaggacagctgaataagtacgag
tcgctggaactctgcagaccagtgcttcagcaaggacgcaaacagctcttggaaaaatgg
ttaaaagaagataagctggagtgctcagaggagctgggagaccttgtgaaatctgtagat
cctacgctagcgcttagtgtctacctgagagccaatgttccaaacaaagtcatccagtgt
tttgctgaaacaggacaagtccagaagattgttttgtatgctaagaaggttggatatact
ccagactggatttttttgctgaggaatgtaatgagaatcagccctgatcaaggacagcag
tttgcacaaatgcttgttcaagatgaagagccccttgcagacataacacaaattgtggat
gtctttatggaatataacttaattcagcaatgtacagccttcttgttggatgcactgaag
aataatcgtccctcagaaggtcccctgcaaacacgtttacttgagatgaacctcatgcat
gcacctcaggttgcagatgctatcctgggaaaccaaatgtttactcattatgaccgggct
cacatagctcaactgtgtgagaaagctggcttgctacagagagcacttgaacacttcaca
gacttgtatgacatcaagcgtgcggtagttcatactcatcttctcaatcctgagtggtta
gtgaattattttggttccttatcggtagaagactctctggagtgtctgcgtgctatgttg
tctgctaacattcgtcagaacctacagatctgtgtccaggtagcttcgaaataccatgaa
caactgtcaacacagtcacttattgagctgtttgagtctttcaaaagctttgaaggtctg
ttttatttcctgggctctattgtaaacttcagccaggatccagatgtgcacttcaagtat
attcaagctgcatgcaagacaggacaaattaaagaagtggaaagaatctgcagggaaagt
aactgctatgatccagaacgtgttaaaaacttcctcaaggaagctaaactcactgaccag
ttgccactcatcattgtatgtgatcgctttgactttgtccacgacttggtgctgtacttg
tatagaaataatctccaaaaatatattgagatttatgtacagaaggtgaatccaagccgt
ctgcctgttgttattgggggactgcttgatgtggattgctctgaagatgtgataaagaac
cttatccttgtagtgagaggtcaattttcaactgatgagcttgttgcagaggttgagaaa
agaaacaggctgaaactgcttctgccctggctggaagcaagaattcacgagggttgtgag
gagcctgcaactcacaatgcactggccaaaatatacattgatagcaacaacaacccagaa
agattcctgcgtgagaatccctattatgatagtcgtgttgttggcaagtactgtgagaag
agggaccctcacctggcctgcgtggcttatgagcgtggacagtgcgatttggaacttatt
aatgtgtgcaatgagaactccctcttcaaaagtctttcccgctacttagttcgccgtaaa
gaccctgaactgtgggccagcgtactactggaaagcaacccttacagaagaccgctcatt
gaccaggttgtacagactgcactgtcggagacacaggaccctgaggaagtctctgttact
gtgaaggccttcatgactgcagatcttcctaatgagcttattgaactgctggagaaaata
gttcttgataactctgtgttcagtgagcacaggaatctgcagaaccttctcattctgaca
gctattaaggctgatcgcacgcgtgtcatggaatacatcaatcgcctggataattatgat
gctccagacatagccaatatagctatcagcaatgagcttttcgaggaggcgtttgctatc
ttcaggaagtttgatgtcaacacatcagctgtacaggtattaatagagcacattggaaat
ctggatcgtgcatatgagtttgctgaacgctgcaacgagcctgctgtatggagtcagctg
gctaaagcacagcttcaaaaagggatggtaaaggaagcaattgactcgtatattaaagca
gatgatccttcctcatacatggaagttgttcaagctgccaatgccagtggaaactgggaa
gaactggtgaagtatctccagatggcacgcaagaaggcccgggagtcgtatgtggaaaca
gaattaatctttgctcttgctaaaacaaaccgtctagcagagctagaggagtttatcaat
ggacctaacaatgcacatatccagcaagttggtgatcgctgttatgatgaaaagatgtat
gaagcagctaagctgttgtacaacaatgtgtccaactttggccgattagcctcgacttta
gttcacctaggtgaatatcaggcagctgtggatggtgctcggaaagcaaacagtactcgc
acatggaaagaggtctgctttgcttgtgttgatggaaaagagttccgcctggcccagatg
tgtggacttcatattgtagtgcatgcagatgagctggaagagctaattaactattaccag
gatcgtggctactttgaagagctgataactatgctagaagcagcacttggacttgagcga
gcacacatggggatgtttacagagctagcaattctctactccaaattcaagccacagaag
atgagggagcacttggagctgttctggtccagagtcaacatccccaaggttctgagagct
gcagaacaagcccatctctgggctgagctggtgttcttgtatgataagtatgaagaatat
gataatgccataatcacaatgatgaatcacccaacagatgcttggaaagaaggccagttc
aaagatatcatcactaaggtggccaatgtggagctgtattacaaggcagttcaattctat
ttggaatttaaacctctgttgctaaatgatctgctgatggtgttgtctcctcggcttgac
cacactcgtgctgtcaccttcttcacaaaggttaaacagctaccactggttaagccttac
ttgcgctctgttcaaaatcacaacaacaagtcggtgaatgagtccctgaacaacctcttc
attattgaagaagactaccaggctcttaggacttctatagatgcttatgacaactttgac
aacatttctcttgctcaacgtttggagaaacatgaactaatagagttccgaagaattgct
gcatatctcttcaaaggaaacaatcgctggaaacagagtgtagaactctgtaagaaagac
aggctgtataaggatgcaatgcagtatgcttcagaatccaaagacactgagctggcagaa
gagttgttgcagtggttcttgcaggagaacaagagagaatgctttggtgcttgtctcttc
acctgctatgatctcctaaggccagatgttgtcttggaaacagcgtggaggcacaacatc
atggactttgccatgccatactttattcaggtcatgaaggaatacttgaccaaggttgat
gcaataaaggaaaaggtggataaactggatgcatcagagtctttgagaaaggaagaggag
caagctacagaaacgcaacctattgtttatggtcagccacaacttatgttgacagcagga
cccagtgtcgcagttcctccacaagcaccttttggctatggctatactgcacctccatat
gggcaaccgcagcctggctttgggtacagcatgtaa
DBGET
integrated database retrieval system
