Phaethon lepturus (White-tailed tropicbird): 104622566
Help
Entry
104622566 CDS
T08325
Symbol
PDS5A
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104622566 (PDS5A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plet03036
]
104622566 (PDS5A)
03400 DNA repair and recombination proteins [BR:
plet03400
]
104622566 (PDS5A)
Chromosome and associated proteins [BR:
plet03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
104622566 (PDS5A)
DNA repair and recombination proteins [BR:
plet03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
104622566 (PDS5A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
Cnd1
EnP1_C
PI-TkoII_IV
Motif
Other DBs
NCBI-GeneID:
104622566
NCBI-ProteinID:
XP_010287698
LinkDB
All DBs
Position
Unknown
AA seq
1334 aa
AA seq
DB search
MDFPAAQPKPAADGKIIYYPPGVKEITDKITNDEVVKRLKMVVKTFMDMDQDSEDEKQQY
LPLALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKDIFLFITRQLKG
LEDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFRTLFSVINNSHNQKVQMH
MLDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQAFDLAKVLLKRTVQTIEPCIANF
FNQVLVLGKSSVSDLSEHVFDLIQELFAIDPHLLLSVMPQLEFKLKSNDGEERLAVVRLL
AKLFGSKDSDLATQNRPLWQCFLGRFNDIHVPVRLESVKFASHCLMNHPDLAKDLTEYLK
VRSHDPEEAIRHDVIVTIITAGKRDLSLVNDQLLGFVRERTLDKRWRVRKEAMMGLAQLY
KKYCLHAEAGKDAAEKVSWIKDKLLHIYYQNSIDDKLLVEKIFAQYLVPHNLETEXXXXX
XXXXXXYLYASLDPNAVKALNEMWKCQNMLRSHVRELLDLHKQPTSEANSAAMFGKLMTI
AKNLPDPGKAQDFVKKFNQVLGDDEKLRSQLELLISPTCSCKQADVCVREIARKLANPKQ
PTNPFLEMVKFLLERIAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDTAIRAGLEL
LKVLSFTHPTSFHSAETYESLLQCLRMEDDKVAEAAIQIFRNTGHKIETDLPQIRSTLIP
ILHQKAKRGTPHQAKQAVHCIHAIFSNKEVQLAQIFEPLSRSLNADVPEQLITPLVSLGH
ISMLAPDQFASPMKSVVANFIVKDLLMNDRSTGEKNGKLWSPDEEVSPEVLAKVQAIKLL
VRWLLGMKNNQSKSANSTLRLLSAMLVSEGDLTEQKRISKSDMSRLRLAAGSAIMKLAQE
PCYHEIITPEQFQLCALVINDECYQVRQIFAQKLHKALVKLLLPLEYMAIFALCAKDPVK
ERRAHARQCLLKNISIRREYIKQNPMANEKLLSLLPEYVVPYMIHLLAHDPDFTKPQDVD
QLRDVKECLWFMLEVLMTKNENNSHAFMKKMAENIKLTRDAQSPDEPKANEKLYTVCDVA
LCVINSKSALCNADSPKDPVLPTKFFTQPEKDFCNDRNYISEETRVLLLTGKPKPTGVLG
TVNKPLSATGRRPYIRTTGSETGSNISVNSDLSSSAGNRSREQSADISETGVSENEENPV
RIISVTPAKTEPVKNKEINSDQATQGNSTERGKKRTATASGTENIHQKTEEKTVDETGPS
LAAKTRRGRPPKPEPQGTTAKNEETNKPPVRGRKRAAVGQESPGSLEAGNAKAPKQQDTA
KKPAAAQRQIDLQR
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atggacttccctgctgcccaaccaaaacctgctgcagacggtaaaatcatctactatcct
cctggagtgaaggagattacggacaaaattaccaacgatgaggtggttaaacggttaaag
atggtggtaaaaaccttcatggatatggaccaggactcggaagatgagaagcagcagtat
ctcccattagccttgcaccttgcgtctgaattcttcctcaggaatcccaataaagatgtg
cgcctccttgtagcatgttgcttggctgatatctttcgtatctatgctcctgaagctcca
tatacttcccatgacaaacttaaggacatattcttgtttattacaagacaactaaaaggc
ttggaggacacgaagagccctcaatttaacagatacttttacttgttagagaatttagct
tgggttaaatcttacaacatctgctttgagttggaagattgcaatgaaatttttattcag
ctttttaggactcttttttcagttatcaataatagccacaaccagaaggtacaaatgcat
atgctggatttgatgagttctatcatcatggaaggcgatggagtaactcaggagctgctg
gactcgattttgattaacctcattcctgcacacaagaaccttaataaacaagcatttgat
cttgcaaaagtcctgttgaaaaggaccgtccagaccattgaaccgtgtattgccaatttt
tttaaccaggttctggtactgggaaagtcttcagtaagtgacttatcagaacatgtgttt
gacttgatacaagagctttttgccatagatcctcacttactgctgtctgtcatgccacag
cttgaattcaagctgaagagcaatgatggagaagaacgtttggctgttgttcgacttctg
gctaaactctttggctccaaagattctgatctggccacacaaaatcgtcctctttggcag
tgctttcttggacggttcaatgacatccatgtccctgtgagattagagagtgtgaaattt
gccagtcattgtttaatgaaccatccagacttagcaaaagacctcactgaatatttgaag
gttagatcacatgacccagaagaagccattcgacatgatgttattgttacaattattact
gcgggcaagagagatctttctttagtcaatgaccagctgcttggctttgtaagagaaaga
acgctagacaagcggtggcgagtaagaaaagaagctatgatgggtcttgcccagctatac
aagaagtattgtcttcatgccgaggctggaaaagatgctgcagagaaagtgagctggata
aaggataaacttttgcatatatattatcaaaatagcattgatgacaaattactggtagag
aaaatctttgctcagtatcttgttccacacaatttggaaacggaagnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnctatttgtatgctagcttggatccaaatgctgtcaaagcgctg
aatgagatgtggaagtgccagaacatgctaaggagtcacgtacgagaattactagacttg
cataagcagcccacttcagaagcaaacagtgctgccatgtttggaaagctgatgaccata
gcaaaaaaccttccagatccaggaaaagcacaagattttgtgaagaaattcaatcaggtt
ttgggtgatgatgagaaacttcggtcccagcttgaactgttaattagtcctacatgttct
tgtaaacaggcagatgtctgtgtgagagagatagcccggaaacttgcaaatccaaagcag
ccaacaaacccttttctggaaatggtcaagtttcttttggaaagaattgcccctgtacat
attgactcagaagccattagtgcactagtaaaactaatgaataaatccatagaggggaca
gctgatgatgaagaggagggtgtaagtcctgatactgctattcgtgcaggacttgaactt
ctcaaggttctgtcctttacacatcctacctcgttccactctgcagagacctatgagtct
ctgctgcagtgcctcaggatggaagatgacaaggtagctgaggcagccatacagattttc
agaaacacgggtcacaaaatagaaacagacctgccacagataagatcaacactaattcca
attttgcatcagaaagcaaaaagaggtactcctcatcaggcaaaacaagctgttcactgt
atacatgccatattttcaaataaggaagtgcagcttgcacagatctttgagcctcttagt
agaagtttgaatgctgatgtaccagaacaacttataactccattagtctcattgggtcat
atttctatgttggctccagaccagtttgcttctccaatgaaatctgttgttgcaaatttc
attgtgaaagatctcctaatgaatgacaggtcaacaggtgagaaaaatggaaaattgtgg
tctccagatgaagaagtttctccagaagtactagcaaaggtgcaagcaattaaacttttg
gtacgctggctgttgggtatgaaaaacaaccagtcgaaatctgcaaattccacactccgg
ttattatcagctatgcttgtcagtgaaggagacttgacagaacagaagcgaatcagtaaa
tcggatatgtctcgactgcggttagctgctggtagtgcaataatgaagcttgcacaggaa
ccctgttaccatgaaataattaccccagaacagttccagctctgtgcacttgtcattaat
gatgagtgctaccaagtgaggcagatatttgcccagaaactgcataaggcacttgtgaaa
ttactgctccctttggaatatatggcaatctttgctttgtgtgccaaagaccctgtgaaa
gagagaagagcgcatgccagacagtgcttgctcaaaaacatcagtatacgaagagaatat
attaagcagaatcctatggctaacgaaaaattgctatccttgctgcctgaatatgtggtg
ccgtatatgattcacttactggcacatgatccagatttcacaaaacctcaggatgttgat
cagcttcgtgatgtgaaagagtgcctgtggttcatgcttgaagttctaatgacaaagaat
gagaacaatagccatgccttcatgaaaaagatggcagaaaacatcaagcttacccgagat
gctcagtctcctgatgagccaaaggccaatgaaaaactttatacagtatgtgatgtagca
ctatgtgtaatcaacagcaaaagtgctttgtgcaatgcagattcaccgaaggaccctgta
ttgccaaccaaattttttacacaacctgaaaaggatttctgcaatgacaggaattacatt
tcagaagagacaagggttcttcttttgacaggaaagccaaaaccaactggtgtattaggt
acggtaaacaaaccattatctgcaactggaaggagaccgtatattagaactacaggatca
gagactggaagcaatatcagtgtaaactctgatctgagctcctctgcaggaaacagatca
agggaacaaagtgcagatatatcagaaactggggtcagtgaaaatgaagaaaatcctgtg
aggattatttcagtcacaccagcaaagacagaacctgtgaaaaataaggagattaattct
gatcaggctacacaaggaaacagcactgaacgtgggaaaaaaagaacggcaacagcatct
ggaactgagaatattcatcaaaaaacagaagaaaaaactgtagatgaaacaggaccatca
ctcgcagcaaaaacaaggagagggcgtccacccaaacctgaacctcagggtaccactgca
aaaaatgaggaaacaaataaaccacctgtcaggggaaggaaaagggcagcagttggtcaa
gaaagtccagggagtttagaggcaggtaacgccaaagcaccaaaacagcaagacacagca
aaaaagccagcagcagcacagagacaaattgatctacaaaggtaa
DBGET
integrated database retrieval system
