Phaethon lepturus (White-tailed tropicbird): 104623073
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Entry
104623073 CDS
T08325
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104623073 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plet03021
]
104623073 (TAF5L)
03036 Chromosome and associated proteins [BR:
plet03036
]
104623073 (TAF5L)
Transcription machinery [BR:
plet03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104623073 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
104623073 (TAF5L)
Chromosome and associated proteins [BR:
plet03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
104623073 (TAF5L)
STAGA complex
104623073 (TAF5L)
TFTC complex
104623073 (TAF5L)
SAGA complex
104623073 (TAF5L)
SLIK complex
104623073 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
TFIID_NTD2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_Vps41
WD40_RFWD3
PEP5_VPS11_N
PROPPIN
Ge1_WD40
WD_LRWD1
eIF2A
Nbas_N
Motif
Other DBs
NCBI-GeneID:
104623073
NCBI-ProteinID:
XP_010288339
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MKRVRTEQIQMAVSCYLKRRQYVDSEGPLKQGLRLCQTAEEMAANLTVQSESGCANVVSA
APCLAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNMVQNGLKSTVDSFY
SRFHGMFLQNASQKDIIEQLQTTMTIQDILSNLKLRAFLDNKYVIRLQEDSYNYLLRYLQ
SDNNNALCKVLTLHIHLDVQPAKRTDYQLYAGGSSSRNESNGLEPSEVPASILQNEAALD
LLQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPNSKLLAAGFDNSCVKLWSLRSR
KLKSEPHLVDVSRIRLACDILDEEEEDDSAGTEMKILRGHCGPVYSTRFLSDSSGLLSCS
EDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISPCSLYFASGSHDRTARLWSFDRTYPLRI
YAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGK
YLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRN
TYCNAPADGSSSELVGVYTGQMNNVLSVQFMACNLLLVTGIAQENQEH
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgtacgcacagaacagattcagatggcagtgtcctgctacctcaagcgccgt
cagtatgtggactcagaaggtcccctaaaacaagggctgaggctgtgtcagactgctgaa
gagatggcagctaatctcacagtccaatctgaatctggttgtgccaacgttgtgtcagca
gctccctgcctggcggagccacagcaatatgaagtacaatttggacgattacgcaatttt
ctcacagattcggattctcagcacagccatgaagtgatgcctcttctgtatcccctcttc
gtctacctccatctgaacatggtccagaatggcctaaaaagcacagtagacagtttttac
agccgcttccatggcatgtttttgcagaatgccagccagaaggatatcattgagcagttg
caaactaccatgactattcaagatatcctgtccaacttgaagctccgggcttttctggac
aacaagtacgtcatccgccttcaagaggacagctacaactaccttcttcgctacctccaa
agtgacaacaacaacgccctgtgcaaagtcctaaccttgcacattcacctggatgtgcag
cccgccaagaggactgactaccagctctacgctggtgggagctcctcacgcaacgagagc
aatggcctagaacccagcgaggtgccggcttccattctgcaaaacgaggcggcattggat
ttactgcaggacagcattaaacgtgtcaaggacgggcccccttccttaacgaccatctgt
ttctatgccttctataacacagagcagttgctgaacactgcagagatttcaccaaatagc
aagctgcttgctgcagggtttgataattcgtgtgtgaagctgtggagcctgcgttccagg
aagttaaaatctgagccccacctcgttgatgtgtcccgcatccgcctggcttgtgacatc
ctggatgaggaggaagaggatgacagcgcaggcacagaaatgaagatcctgagaggacac
tgtggacctgtgtatagcacacggttcctttcagacagttcgggactcttatcttgttct
gaggacatgtccatcagatactgggacctcagaagttttacaaacactgtgttgtaccaa
ggacatgcctatcctgtctgggatttggatattagcccctgcagcctgtactttgccagt
ggttcccacgatcgcactgcaaggctctggtcatttgatcggacgtacccgctgcgaata
tatgcaggccatttggcggatgtagactgtgtcaagttccaccccaattccaactactta
gcgacagggtccacggacaaaactgtgcgcttatggagcactcagcaaggcaactcggtg
cgtcttttcaccggccaccgtggccccgtgctagcgcttgcgttttctcccaatggtaag
tacctggcatcagcaggtgaagaccagcggctaaagctgtgggacttggcatcaggaact
ctttacaaagaactgagggggcacacagacaatataaccagccttacttttagccccgac
agtagtttaattgcttcggcgtcgatggacaattcagtccgggtctgggacattcggaac
acttactgcaacgcccctgcagatgggtcttccagtgaactggttggtgtatataccgga
caaatgaataatgtactgagcgtacagtttatggcctgtaatcttcttctagtgactgga
attgcacaagaaaatcaggaacattaa
DBGET
integrated database retrieval system
