Phaethon lepturus (White-tailed tropicbird): 104623177
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Entry
104623177 CDS
T08325
Symbol
DDX54
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plet03009
]
104623177 (DDX54)
Enzymes [BR:
plet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104623177 (DDX54)
Ribosome biogenesis [BR:
plet03009
]
Eukaryotic type
Pre-60S particles
Helicases
104623177 (DDX54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Motif
Other DBs
NCBI-GeneID:
104623177
NCBI-ProteinID:
XP_010288482
LinkDB
All DBs
Position
Unknown
AA seq
710 aa
AA seq
DB search
VEPLRAPGQAGARALILSPTRELALQTLKFTKELGKFTGLKTALILGGDKMEDQFAALHE
NPDIIIATPGRLVHVAVEMKLKLHTVEYVVFDEADRLFEMGFAEQLQEIIARLPDCHQTV
LFSATLPKLLVEFARAGLTEPMLIRLDVESKLSEQLKLAFFHVRGDDKPAVLLHLLRSVV
KPQDQTVVFVATKHHTEYLKELLTAQGIRCTHIYSSLDQTARKINIAKFAQGKCPVLLVT
DVAARGLDIPMLDNVINYSFPAKAKLFLHRVGRVARAGRSGTAYSLVAPDEMPYVFDLHL
FLGHPLVLAGAQEMPADAGGVLGRVPQSLVDDEECLLLTDHEGSLELRSLRRVADNAHKQ
YLRSRPGPSPESIKRAKDLDVSQLGMHPLFSARFEDTELERLKFVDSIKTYKSKATIFEI
NATSRTLASTVMRSKRRHDHALIEKYQRGQQEKRAAALKGQGLCPAPARPKEGGGEGEEE
NLQVTWQGXGVCCGRRSCCKAASGRCWQHWGPQAVPGVGGATASEGGLSVGGEGSAFEQQ
AAGAVLDLMGDENHNLNKSKQLLKWDRKKKRFVGQTGQEDKKKVRTESGRYISSSYKNNL
YEKWKQKYKVDERDEDEDDGGGREQFRGKRRHGHGPGQPPARGRVRSELKNKQQILKQRK
KAAKQRFLQSGGLKRLKARNRQRVQELRQMAFGRHSGFPRAWAGCWGKRH
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtcgagccgctgagggcgcccggccaggccggggcgcgcgccctcatcctctcgcccacc
cgtgagctggccctgcagaccctgaagttcaccaaggagctgggcaagttcacaggcttg
aagacagctctgatcctgggaggagacaagatggaggaccagttcgctgccctgcatgag
aatcccgacataatcatcgccacccccgggcgcctggtgcacgtggcggtggagatgaaa
ctgaagctgcacaccgtggagtacgtggtgttcgacgaggctgacaggctctttgagatg
ggctttgccgagcagctccaggagatcatcgcccggctcccggactgccaccagaccgtc
ctcttctccgccacgctgcccaagctgctcgtcgagtttgcccgggccggtctcactgag
ccgatgctaatccgtctggatgtggagtccaagctcagtgagcagctcaagctggctttc
ttccacgtgcgcggggatgacaaaccggccgtgctgctccacctgctccggagcgtggtg
aagccccaggaccagacggtcgtcttcgtggccaccaagcaccacacagagtatctcaag
gagctgctgacggcccagggcatccgctgcacacacatctacagctcactggaccagacc
gcccgcaagatcaacatcgccaagtttgcccagggcaagtgcccagtgctgctggtcacc
gacgtggctgcccgcgggcttgacatccccatgctggacaatgtcatcaactacagcttc
cccgccaaggccaagctgttcctgcatcgcgttggtcgtgtggcccgcgctggccggagt
ggcactgcctactcgctggtggctcccgatgagatgccctatgtcttcgacctccacctc
ttcctggggcacccgctcgtcctcgccggtgcccaggagatgcccgctgatgccggtggg
gtcctgggccgtgtcccccaaagcctggtggacgacgaggagtgcctgctgctgacagac
catgagggctcgctggagctgcggagcctgcgccgtgtcgccgacaacgcccacaagcag
tacctgcggtcccggcctggcccctcgcctgagtccatcaagagggcgaaggacctggac
gtgtcccagctgggcatgcacccgctcttcagtgctcgcttcgaagacactgagctggag
aggctgaagtttgtggacagcattaaaacctacaagtccaaggcgaccatcttcgagatc
aacgccacgtcccggacgctggccagcaccgtgatgcggtcgaagcggcgccacgaccat
gccctcatcgagaagtaccagcgcgggcagcaggagaagcgggcagcagctctcaaaggg
caggggctgtgcccggcccccgccaggcccaaggaaggaggaggagaaggagaggaggaa
aacctccaggtaacatggcagggataaggagtttgctgtggccgccggagctgctgcaag
gcagcctcgggcaggtgctggcagcactggggcccccaggctgtgccaggggttgggggg
gccactgcaagcgagggggggctgagcgtgggcggtgagggcagtgccttcgagcagcag
gcggccggagccgtcctggatcttatgggtgatgaaaaccacaacctcaacaagagcaag
cagctgctgaagtgggaccgcaagaagaagcggttcgtggggcagacgggccaggaggac
aagaagaaggtgcggacggagagtgggcgctacatcagcagctcctacaagaacaacctc
tatgaaaaatggaagcagaaatacaaggttgatgagcgggacgaggatgaagacgacgga
ggaggcagggagcagttcagagggaagcgcaggcatgggcacgggcccgggcagcccccc
gcccggggcagggtgcgctcggagctgaagaacaagcagcagatcctgaagcagcgcaag
aaggcggccaagcagcgcttcctgcagagcggggggctgaagcgcctgaaggccaggaac
cggcagcgggtgcaggagctgcggcagatggccttcggccggcacagcggcttcccccgc
gcctgggctgggtgctggggaaagagacattaa
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