Phaethon lepturus (White-tailed tropicbird): 104623655
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Entry
104623655 CDS
T08325
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet04110
Cell cycle
plet04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104623655 (SMC1B)
04114 Oocyte meiosis
104623655 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plet03036
]
104623655 (SMC1B)
Chromosome and associated proteins [BR:
plet03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
104623655 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
104623655 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
DUF7491
Motif
Other DBs
NCBI-GeneID:
104623655
NCBI-ProteinID:
XP_010289107
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All DBs
Position
Unknown
AA seq
1221 aa
AA seq
DB search
QQVIGPFMRFNCIIGPNGSGKSNIMDAVSFVMCEKTSNLRVKSVRELIHGAHVGKPVSST
ASVKIVYCEDDGEEKTFSRIIRGSCTEFFFNDKSVSRSTYISELEKVGILVKARNFLIFQ
GTIESIAMKKPKERTQLFEQISNSWEYAEEYERKKKKMQQAEEDAQFNYNKKKSVAAERK
QAKIEKEEAEHYQMLLKELDEERIQLQLFRLYHNEKNIDFLKKNLDEKNMEARIKKDSLS
TEEDAFRAKKKVLGVLNRDQQHMERELKTLEASLIQQRALYIKAKENTSYQIKKVEMSKK
SLRDKEKSCDKEKQNIKELEKELNDIEKAWRAFEKKTEEEILQRAADIELEESQLERYKE
LKEIARKKVATLAQQLKNLRWEEKADQERLKLNRRKKKEVEENIKQTVEQIEEHKNRIEK
LEEYAKICTESLAEKKQQEEVLTKEIESSTIRMAEVNEELNKIVGELQNAKIDYHEGRRQ
QMRAEILESLRRLYPDSVFGRLLDLCHPIHKKYQLAVTKVFSKYMTAIVVATEKTARDCI
RFLKQERAEPETFLALDYLDVKPINEKLREIKGAKMLVDVVQTPFAPLKKVIQFVSGNGL
VCETVKEAKQIAFDGPVRLKTVSLDGTLFLRSGVISGGSSDLRFKARCWDDKEMNKMKER
RDSLIHELKDLMKIKRKETDLKQLHAQCHGIQTRLKYSQSELELIKKKHLANLYTEKSKL
ESELVNIESQHDMLNEGIAQRKGKIEEFQAKINEAEDAVFQEFCQEIGIENIRVYEQEHV
RLQEEIDKRRLEFENQKTRLNIQLEYNRDHLQKLTNTVSKLKETIHKDEAEITGLQKDEE
KLLKKVNGIMEEQQHLKDRLSAHKSEVIKTQNEVEEFRKTLLTLNREATKLQKEATGIET
SLEEQRLRRHNMLLECKVQDLKIKLLSGSLDDISEVELGTETEATQTTSSIYEREEAIQI
DYSTLAEDLKDLDSDKDIEDHLNQMQQEIKSKENTLMKTAAPNLRAVEKLQIARDKFQES
MDAFETSRKEARICKQEFEQVKKKRYELFSRCFEHAAVAIDEIYKKLCRNSSAQAFLSPE
NPEEPYLEGIGFNCVAPGKRFMPMDSLSGGEKSVAALALVFAIHSFRPAPFFILDEIDAA
LDNTNIDKVSSFIREQAHEQFQMIVISLKEEFYCKADALIGVCPERDDFMFSRVLTLDLT
EYPDIGDQERTEEHKRSSVSA
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
cagcaggttatcggccccttcatgaggttcaactgcatcatcgggcccaacggatcagga
aaatctaacataatggatgctgttagttttgtgatgtgtgaaaagacatctaatttgcga
gttaaaagtgttagagaacttattcacggagcacatgttggaaaaccagtttcttctaca
gctagtgtgaagatagtatattgtgaagatgatggggaagaaaaaacattttcaagaatt
atccgtggtagttgtactgaattttttttcaatgataaatctgtcagccgatctacttac
atatctgagcttgaaaaagtaggcatacttgtaaaagctaggaattttcttatctttcag
ggaacaatagaatcaattgcaatgaagaagccaaaggagagaactcaactttttgaacaa
atcagtaattcatgggaatatgctgaagaatatgaacgaaaaaagaaaaaaatgcagcaa
gcagaagaggatgcacagtttaattataacaagaaaaaaagtgttgcagcagaacgtaaa
caagcaaagatagagaaagaggaggcagagcattaccagatgcttctcaaagaactggat
gaagaaaggatacagctgcagcttttccggctttatcacaatgaaaaaaacattgacttt
ctgaaaaaaaatttggatgaaaagaatatggaggctcgtatcaagaaagactccctgtct
acagaagaagatgcatttagagccaagaaaaaagtgcttggtgtactaaacagagaccaa
cagcacatggaaagagaactgaagactctggaagcatcactgattcagcagagagccctc
tatataaaagcaaaggaaaacacttcctaccaaatcaagaaagtagaaatgtctaaaaaa
tctctaagagacaaggagaaatcctgtgataaagaaaagcagaacattaaagaactagag
aaagaattgaatgatattgagaaggcgtggagagcatttgagaagaaaacggaagaggag
atactgcagagagcagcagatattgagcttgaagaaagtcagttggagcgctataaagag
ctaaaggaaatagcaagaaagaaagtagctacactagcccagcagctaaaaaaccttcgt
tgggaggaaaaagcagatcaagaaaggctgaaacttaatcggaggaaaaaaaaagaagtt
gaggaaaacataaaacagactgtggaacagatagaagagcataaaaacagaatagagaag
ttggaagaatatgccaagatatgcactgagtcgttagcagagaaaaaacagcaagaggaa
gtgctaactaaggaaatagaaagttcaacaatacgaatggctgaagtgaatgaagaattg
aacaaaatagttggtgaactgcagaatgccaaaattgattaccatgaaggaaggcgtcag
caaatgagagcagagatcctggaaagtctcagaagactatatccggattctgtgtttgga
agactactcgacctgtgtcatcctattcataaaaaataccagcttgctgttaccaaggta
ttcagcaaatacatgactgctattgttgttgccactgaaaaaacagcaagagattgcatt
cggttcctaaaacaagaacgagctgaacctgaaactttccttgctttggattaccttgat
gttaaaccaatcaatgaaaagttaagagagatcaagggagctaaaatgttggtggatgtt
gtacaaactccatttgctccactgaaaaaagtgattcagtttgtgagtgggaatggcttg
gtctgtgaaacagttaaagaagcaaaacaaatagcgtttgatggaccagtgaggttgaaa
acagtgtctcttgatggaactttatttttgagatctggagtaatttctggaggatcaagc
gatttaagatttaaagctagatgttgggatgataaagaaatgaataaaatgaaagaaaga
agagatagtttgattcatgagttaaaggacttaatgaagatcaaacgtaaggagactgac
ctgaagcagttgcatgctcaatgtcacggaattcagacacgacttaaatattcacagagt
gaattagagcttattaaaaagaaacacctcgctaatctctatacggaaaaatcaaaactg
gaaagtgaactggtaaatattgagtctcagcatgatatgctgaatgaaggaatagcacaa
agaaaaggaaaaattgaagaatttcaggcaaaaattaatgaggctgaagatgctgttttc
caggagttctgtcaagaaattggtatagaaaatattcgtgtgtatgaacaagaacatgtg
agactacaagaggagatagataagagaagactggagtttgaaaatcagaagacacgacta
aacattcaactggaatataatcgtgatcatctacaaaaattaacaaacacagtcagcaag
ttgaaggagaccattcataaagatgaagctgagattactgggctacagaaggatgaggaa
aagctactaaaaaaagttaatggaattatggaggagcagcaacatcttaaggatagatta
agtgctcataaatctgaggttataaaaacccaaaatgaagttgaagagttcagaaagacg
ttgttaactcttaatagggaagctacaaagttacaaaaggaagctacaggtatagaaacg
tctctggaagagcaaagattaagacgacataatatgcttcttgaatgcaaagtgcaggac
ttgaaaataaaactcctgtctggatcactggacgacatcagtgaagtagagctaggaact
gaaacagaagccactcagactacgtcaagtatctatgaaagggaagaggcaattcagata
gactacagcaccctagcagaagacctgaaggacctagactctgataaagatatagaagat
catctgaaccagatgcagcaggaaataaaatctaaagagaatactttaatgaagacagct
gctccaaacttgagagcagtagagaaattacagatagctcgggacaagttccaagagtca
atggatgcttttgagaccagcagaaaggaggccagaatatgcaagcaagaatttgaacag
gtgaaaaaaaagagatatgagctgtttagccggtgctttgagcatgccgccgtagctatt
gatgagatctacaagaaactttgcagaaacagtagtgctcaggcattccttagtcctgaa
aatcctgaggagccttatctggaaggcattggctttaactgtgtggctccaggaaagcgc
tttatgccaatggacagtttgtcaggaggtgaaaagtctgtggcagctctggctcttgtg
tttgctatacacagttttcgtccagcacctttttttattttagatgagatagatgctgcc
ctggataatacaaacattgataaagtatcaagtttcattagagaacaggcacatgaacag
tttcaaatgatagttatttctctaaaggaagagttttattgcaaagcagatgcattgatt
ggagtgtgtcccgagcgtgatgactttatgttcagtcgagtactgactttggatcttacc
gagtatccagacattggtgaccaggaaagaacagaggagcacaaacgcagttctgtttca
gcataa
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