Phaethon lepturus (White-tailed tropicbird): 104623742
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Entry
104623742 CDS
T08325
Name
(RefSeq) LOW QUALITY PROTEIN: chondroitin sulfate glucuronyltransferase-like
KO
K03419
chondroitin polymerizing factor 2 [EC:
2.4.1.226
]
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
plet01100
Metabolic pathways
Module
plet_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
104623742
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
plet01003
]
104623742
Enzymes [BR:
plet01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
104623742
Glycosyltransferases [BR:
plet01003
]
Glycan extension
O-Glycan
104623742
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Fringe
PAS_11
Motif
Other DBs
NCBI-GeneID:
104623742
NCBI-ProteinID:
XP_010289215
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MVLVAHGDERPIWLMYETMHYIHQHFGSDYDWFYIMQDDTYAQAEQVKALVTHLSINQDV
YLGRAEEFIGGDEQARYCHGGFGYLISRSLLLKLHLHLDSCRNEILSVRPDEWLGRCIID
FLGITCVSQLQGQHYHTYELAKNTEPEKEEEEEFQAALAVHPVSDMTLMYRLHKHFRRIQ
LDRAYQEIQDLQMQIRNLTSLTPAGEAGLTWPVGINAPFLPKSRFEVISWDYFTEQHLFS
CPDGSPKCELSGASKADVSEIIESALEQLNSRYQPLLRFSKRQLLNGYRRFDPTRGMEYT
LDLLLEAVTQKGHSHVLAKRVSLVRPLSKVEIIPMPYVTEATRVQLVLPLTVQDLDFVAN
FLDMFAMNTLDTHDNALLTLLFIYHPYDAQRVSQVDVFAGVKAMIGELEKRYAEVKIPWI
SVKTEVPSQVKLMDIVSKKHPVDTLFFLASVWTEINMEFLNRXXXXXXXXXXSNWQVFFP
VHFQEFNPALMYRGEQTASSSTDFLRDGHFDRHSFAEACFYNSDYMTARTKLAADILDRD
EVLESMEVFDVFLHYSGLHLFRAVEPGLVQKYALRSCNPRLSEELYHRCVLSNLEGLASR
SHLAMALFEQEQANST
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtgctggtggcccatggggatgagcgtcccatttggctcatgtatgagaccatgcac
tatatccatcagcattttggttctgactatgactggttctacatcatgcaggatgacacc
tatgcccaggctgaacaggtcaaggctctggtgacacacctaagtattaaccaagatgta
tacctgggacgagcggaggaatttattgggggagatgagcaggcccgctactgccatggt
ggctttggctacctgatctcccgcagcctgctgcttaagctccatctgcacctggacagc
tgtcgcaatgagatccttagtgtgcgtccagatgagtggctgggacgttgcatcattgat
ttccttggcatcacttgtgtttcccagctccagggccagcattatcacacctatgaattg
gccaaaaatactgagccagagaaggaggaagaagaggagttccaagcagctcttgctgtg
caccctgtttccgacatgaccctgatgtaccggctgcacaagcacttccgcaggatccaa
ttggacagagcctaccaggagatccaggacctccagatgcagatcaggaacctgacgtca
ttgacccctgcaggtgaggcaggcttgacgtggcctgtgggcattaatgccccatttctt
ccaaagtcacgttttgaggtaatcagctgggactacttcactgagcagcacctcttctcc
tgtcctgatggctcccccaagtgtgagctctctggagccagcaaagcagatgtcagtgaa
atcattgagtctgcacttgagcaactcaacagtcgctaccaacctctgctgcgcttcagc
aagcggcagttgctgaatggctatcggcgttttgaccccacacggggcatggaatataca
ctggacctactgctagaggcagtgacccaaaagggtcacagtcatgttctggccaaacga
gtgagcttggtgcggcccttaagtaaggtggaaattatacccatgccgtatgtgacagag
gccacacgggtgcaactggtgcttcccttgacagtgcaggacctggattttgtggcaaac
ttcctggatatgtttgctatgaacacactggacacacatgataatgccttgctgactttg
cttttcatctaccatccctatgatgcccagcgagtcagtcaggtggatgtttttgctgga
gtcaaagccatgataggagagctagagaaacgctatgcagaagttaaaatcccctggatt
agtgtcaaaactgaggtgccatcgcaagtgaaactcatggatatagtctcaaagaagcac
cctgtggatacactcttcttcttggccagtgtctggacagaaatcaacatggagttcctg
aaccgnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcagcaattggcaggtctttttccca
gtacatttccaagagttcaatcctgcgttgatgtaccgtggtgagcagactgcttcttcc
agcactgacttcctgagggatgggcattttgacagacattcatttgctgaggcctgcttt
tataactctgactacatgacagcacgtaccaagctagcagctgatatcttagatcgagat
gaggtgctggagagcatggaggtatttgatgtcttcctccactattccggtctgcaccta
tttagggccgtggagccagggttagtgcagaaatacgcactaaggagctgcaatccccgg
cttagtgaggagttataccaccgctgtgtgcttagtaacttggaaggacttgcatcccgc
tcacatttagccatggccctctttgagcaggaacaagccaacagcacttaa
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