Phaethon lepturus (White-tailed tropicbird): 104624292
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Entry
104624292 CDS
T08325
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet03013
Nucleocytoplasmic transport
plet03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104624292 (PNN)
03015 mRNA surveillance pathway
104624292 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plet03019
]
104624292 (PNN)
03041 Spliceosome [BR:
plet03041
]
104624292 (PNN)
Messenger RNA biogenesis [BR:
plet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104624292 (PNN)
Spliceosome [BR:
plet03041
]
Complex C
Other components
EJC/TREX
104624292 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
104624292
NCBI-ProteinID:
XP_010289929
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
NRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQAEEERKQVENERRELFEERRA
KQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPHLFYIPGRMCPATQKLMEESQK
KMNALFESRRNEFAEQINKMEARPRRQSMKEKEQQEVQNEEKKEEQNKEQEEGKVAQQVE
ELETGNQHNDVEMEEVGEEKGKAGSGHSDAEKEQEEDEQKHEMEIKVEDSTEVRENDKQQ
DGQHEEVTVVKEEGENIQPVDNEQDVAEINETDSVEPVENENGKEVEPETECDAQTEKVC
SVSSPEKEKGIKPEIEAEPEEKQEKAPEAQPEHMAEAVSQPQSVPLPQSPQLSQSTQDTE
PQADKDENAAVSVKVVEAQTEQSQTQSVEIKNKTRSRSRGRAGNKTGKSHSRSSSSSSSS
STSSSTSSGSSSSTGSSSSRSTSTSSSTTSGTTSRDSSSSSSSSSESRSRSRGRGHNRDR
KRRRSTDRKRRDASGVDRSHKSSKGGSRDTKSSKDKSSRSDRKRSISESSRSGKRTSRSE
RDRKSDRKDKRR
NT seq
1660 nt
NT seq
+upstream
nt +downstream
nt
gaatcgacgtatatttggcttgttgatgggcactcttcagaaatttaagcaggagtccac
agttgctactgaaaggcaaaagagacgacaagagattgaacaaaaacttgaagtgcaggc
agaggaagaaagaaagcaagttgaaaacgaaaggcgagaactgtttgaagaaaggcgtgc
taaacagacagagctgcggttattggagcaaaaggttgagcttgctcagttgcaagaaga
atggaatgaacataatgctaaaataattaaatacataagaacaaagacaaaaccccactt
attctacatacctggcagaatgtgtcctgctacgcagaagttgatggaagagtcacagaa
aaagatgaatgcactctttgaaagcaggcgaaatgaatttgcagagcagattaacaaaat
ggaggccaggcccagaagacaatccatgaaggaaaaagaacagcaggaggtgcagaatga
agaaaagaaggaagaacagaacaaggagcaggaagagggtaaggtggctcagcaggtgga
agagttggagacaggtaatcagcacaatgatgtagaaatggaagaggtaggggaggaaaa
gggaaaagcaggttcagggcatagcgatgcagagaaagaacaggaagaggatgaacagaa
acatgaaatggagattaaagtagaagattctactgaggtgagggagaatgacaagcaaca
ggatggtcagcatgaagaggtcacagttgtaaaagaggaaggtgaaaacattcagccagt
ggataatgagcaggatgtggctgaaataaatgagacagatagtgtagaacctgtagaaaa
tgaaaatggcaaagaagtggaaccagaaacagaatgtgatgctcagacagaaaaagtgtg
tagtgtttcgtctcctgagaaggagaaaggtatcaaaccagaaattgaagctgaacctga
agaaaaacaggagaaggcacctgaagctcagccagaacatatggctgaggctgtatctca
gccgcagtctgtgccactgccacagtcacctcagttgtctcagtccactcaggatacaga
gccccaggcagacaaggatgaaaatgctgcggtgtctgtaaaggtggttgaggcacagac
agagcagagtcagacacagagtgtagagattaagaataagactaggagtagaagcagggg
tagggcagggaacaaaactggtaagagtcatagccgtagtagcagcagcagtagtagcag
tagtacttcgagcagtactagtagtggaagtagttccagcactggcagcagtagcagtcg
aagtacttccaccagcagcagcactacaagtggaaccactagcagggacagtagcagcag
tagctctagcagtagtgaaagtagaagtcgaagccgaggaagagggcataacagagatag
gaaacgcagaaggagcacggacaggaagcgaagggatgcttcaggagtagatagaagtca
caagtcctcaaaaggtgggagtagagataccaaaagctcaaaggataaaagttcaagatc
tgacagaaagaggtctatatcagaaagtagtcggtcaggcaagagaacttcacggagtga
aagagaccgtaaatcagacaggaaagacaaaaggcgttaa
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