Phaethon lepturus (White-tailed tropicbird): 104624334
Help
Entry
104624334 CDS
T08325
Symbol
LMO7
Name
(RefSeq) LIM domain only protein 7
KO
K06084
F-box protein 20
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
104624334 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plet04121
]
104624334 (LMO7)
Ubiquitin system [BR:
plet04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
104624334 (LMO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
PDZ
LIM
PDZ_6
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
104624334
NCBI-ProteinID:
XP_010289980
LinkDB
All DBs
Position
Unknown
AA seq
1629 aa
AA seq
DB search
MHDSHKDDRSYRRISVIEPKPTADFNRFLPNKNKQAAYVPAPLRKKRTEKNEDNRRSWAS
PVFTESDGTFSSGREKNPVASCQNSRAECGLTNPASLQMIYEYASGSDSEDERRLPDVVM
DDLAKRRFLVKKSPVSSAAPGHHFMLRNDSPKSCSQESYPAGPLAAVLEPLSNQRRQRQL
DTKEENKPRVNIPSELSGCFDEDEEEEIGIPNIEKDDLYFRKLNSSAANTVVAFDKFLPK
FWTPEEELLWKKIRKSSFKPWYKEIQGFSRKKSDSEDEEFAYKQSSSILANQPRPSFDWN
SSCRRDQSYKPTAEYVGSSLSQIAEGKILEASDQPSQFSLLQALQKYSDYLSSETKTKID
PTSGPRLIKCRKNISFVPGCKQGDMENGYLYPDLENDDLFVRKTGAYHVNQVVLQDPRYL
KKFSEQEPPLEGEIILQPRDGQPVIPDLEKDDMIFRKILSQKKEVPLSGAPDKYHPALLP
DPWSLPEEIRSKFLCLLEKTTTLEERKSNGRVLSPSSHHKKDDMLTRKIASWKVGSNVQP
VNFIPGPCSEEDWKKWEAIREASKVRHKKRQMVERLFQKLSDEQGSKSLNDVSAEELQSL
RKIRYEELQRIKEQLQEQDLKWQEDLAKWKNRRKSFTSELQKKKEEREEIERRASEVSER
STKSLKEMQQEREDRDQDSYRQRKHECRWTYSLNDDVFSEEKAPSTRSAAKDYLLEEDTS
CSTKDSKSAYAAQPCEENLPESSAAHEAPALPKSLAEEQSSALLSTRYSVNAQTGSAQVS
ASFPRSYQKTDTSRLTSVVTPRPFGVHSRGISSLPRSFTMDDTQKYNGEVEKAKRTQTLF
TSSSFSQPDSAHPLSTSAFGSRGEEEEEKEGVQSTPPPSLALPVKSQDQDAGSSILKPEY
CSPPDSLSLASSAENVSLPEPEDSKSLEQYSEMRISINQRPGHSRSFGFTTNWSSSGAFV
QTVEEGSPAALCQLHVDDEIIAVNGTKVSRMDYSQWEEAISRALETGNLLMDVRRYGKND
WGKDQPSLLHVRHKILNLTSMATNIIGTSENKWIDATSGEHISNVSTISTKRDFSSSLRS
SDTETKLINGMQGDLGSNEQRASEPISLKNLKRRSQFFEQGGPEPAMPDLPVPSISAPSR
RVWDQEEERKRQEKWQKEQDRLLQEKYQREQEKLREEWLRAKQEAEKESSKYFDEEQTVL
TLNRTSVPARAPSVSSWRASPESNIPEEPEGDGGSELAARLLDEEEETRRLQEEQRIQEE
VALRFAQERELQELELERQRKEREQQYAEEQRRRAEMEEQRRQAERQREASVEMPQYQRH
YERYEVSKTVEDRAGHPLIDRHYERYEVSKTIEEQPGQSFADRNKSKSTSELNEFNTIRN
GTQSKCSERSWNTGDSQKKSQKEHNLSAAELERQQILQEMRKKTSLHTDSSWIRQRSSSI
HKEPINLYSNSMRRGESLDNLDSSRTSSWRHHSWLNQSASSSSLSSSQDFSRPVSTSNRA
YMCTPSSSKAPPAATSARAPSMSQAAPRAQSPLSASQPGSQTRSRSVSGKKICSYCNNVL
GKGAAMIIESLGLCYHLQCFKCVACGCDLGGSRSGAEVRIRNNKLFCNDCYIRFKSTSSG
GIDLLTDLN
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atgcatgactcacataaagatgacaggtcttaccgtaggatttctgtgattgaaccgaaa
cctactgctgacttcaatcgcttcttacccaacaaaaacaagcaggcagcgtatgtgccg
gcgcccttaaggaagaagaggacagagaagaatgaggacaacaggagaagctgggcaagt
cctgtcttcactgagtcagatggaacgttttcaagtggacgtgaaaagaatcccgtagct
tcctgccaaaatagcagagcagagtgtgggctcacaaatccagcttccctccagatgatc
tatgagtatgccagtggctctgattcagaagatgaaagaaggctgcccgatgtggtcatg
gatgacttagcaaaacgtagatttctagtcaaaaagagccctgtaagctctgctgcacct
ggacatcatttcatgttgcgcaatgactctcctaaatcttgctcacaagaaagttatcca
gctgggccactagctgcagtgcttgaaccactgagtaaccagaggaggcagaggcagttg
gatactaaagaggaaaacaaaccaagagttaacattccttcagaattatctggctgtttt
gatgaggatgaggaagaagaaataggcatcccaaacattgaaaaagatgatctctatttt
cgcaagctaaattcttcagcggcaaatacagttgttgcttttgacaaatttcttcctaaa
ttttggactccagaagaagaattgctatggaaaaaaatcaggaaatcctctttcaaaccc
tggtataaagagattcaagggttcagcagaaagaaatcagattctgaggatgaggaattt
gcttataaacaaagctcttccattcttgctaatcaaccaagaccaagttttgactggaac
agcagttgcagaagggatcagagctataagccaactgctgaatatgtgggaagctcattg
tcacagattgcagaaggaaaaatcttggaggcttctgatcagcccagtcagttttcgtta
cttcaggccctgcaaaaatactctgactacttgtcttctgaaacgaagaccaaaattgat
cctacttctggccctaggctcataaaatgtagaaagaatatttcctttgtaccaggatgc
aagcaaggagacatggaaaatggatatctgtatccagatttagaaaatgatgacttgttt
gttcggaaaaccggggcttaccatgtgaatcaagttgttctccaggacccccggtattta
aaaaaattctctgagcaggagcctcccctagagggtgaaataattctgcaacccagagat
ggccaacctgtgattccagatttggaaaaggatgacatgattttccgtaaaatcctctct
cagaaaaaagaggtgcctttatcaggcgctccagacaagtatcacccagcactcttgcct
gacccgtggagtcttccagaggagatacggtccaaatttctatgtttacttgaaaaaacc
acgacactggaggaaaggaagagcaatggcagagtgctgtcaccatcttcccaccataag
aaggatgatatgctgacccgcaagattgcatcttggaaggttggaagcaatgtccagcca
gtaaatttcatcccgggtccatgcagtgaagaagactggaagaagtgggaagcaatcagg
gaggccagcaaagttagacacaagaaacggcagatggtggagagactgtttcaaaagctt
tctgatgagcaagggagtaaatctttgaatgatgtcagcgcagaggagctgcagtcattg
cgcaaaatccgttatgaagagctacaaaggataaaagaacagttacaagaacaagatcta
aagtggcaggaagatctagcaaaatggaagaatcgtagaaagagctttacttcagaattg
caaaagaaaaaggaagagagagaagaaatagaaaggagagcctctgaggtgtctgaaagg
agtaccaagtcactgaaagaaatgcagcaggagagggaagacagagatcaagattcctac
aggcagcgaaaacatgaatgcagatggacgtattctctgaatgatgatgtgtttagtgaa
gaaaaagcaccttccacacggtcagcagcaaaagattaccttttggaagaagatacctcc
tgcagcactaaggacagcaaaagtgcatatgccgcacaaccgtgcgaagagaacctgcca
gagagctcagccgctcatgaagctcctgccctgccaaagagcctggcagaggagcagagc
tcggctcttttgtctacgcgctactcggtgaatgctcaaactgggtcagctcaggtttca
gcttctttcccgagaagttaccagaaaactgatacctctaggttaacatctgtggttaca
ccaagaccttttggtgtccattcaagaggaatctcgtcacttccacggtcgttcacgatg
gatgatacccagaaatacaatggagaagtagaaaaagctaaaagaactcaaactttgttc
acgagcagttcattttcacaaccagactctgcacaccctctctccactagtgcattcgga
agcagaggtgaggaggaggaggaaaaagaaggtgttcagtcgacacctcctcctagtttg
gcattacctgtaaaatcccaagaccaagatgctggaagcagtattcttaaaccagagtat
tgctctcctcctgattctctttcacttgcatcttctgcagaaaatgtgagtcttccagag
cctgaggattcaaaatccctggaacagtacagtgaaatgagaatcagtataaaccagaga
cctggccacagtcgcagctttgggtttacaacaaattggagttcttcaggggcctttgta
cagacagtggaagaaggtagccctgcagcactttgtcagctgcatgtagatgatgagatc
attgctgtcaatggcacaaaggtttcacgtatggactacagtcagtgggaagaagccatc
agcagagcactagaaactggaaaccttctcatggatgtcagacgatatggaaagaatgat
tggggcaaagaccagccttccctgctacatgtaaggcataaaatcctcaatctcaccagt
atggctaccaacattataggtacatctgaaaataaatggattgatgcaacttctggagaa
cacatttcaaatgtttccaccatatcaacaaaaagagatttttccagcagccttcgaagt
tctgatacagaaacaaaattgataaatggaatgcaaggagaccttggctctaatgaacaa
agagcatctgaacctatttctttgaaaaacttaaaaagacggtcacaattttttgaacaa
ggaggcccagagcctgcaatgcctgatctcccagtcccatcgattagtgctcctagtcgt
cgggtttgggatcaagaggaagaacgaaaacgacaggaaaaatggcagaaggagcaggac
cgtttattgcaggagaaataccaacgggaacaagaaaaactgagggaagaatggctacga
gctaagcaggaagcagaaaaagagagctccaagtattttgatgaggagcagactgttcta
accttaaacagaacatctgtccctgcacgggctccatctgtgtccagctggagggcaagc
cctgaatcaaatattcctgaggagccagaaggagatggaggaagcgagctggcagcgcgc
ttgctggatgaggaagaagaaacgaggaggcttcaggaggaacagaggatccaggaagaa
gtagccctgcgttttgcgcaagaaagggaactccaagagctggagcttgagagacaacgt
aaagagagagaacagcagtatgctgaggagcagaggcggcgggcagagatggaggagcag
aggcggcaggctgaaaggcagagggaggcgtcagtggagatgcctcagtaccaaagacat
tatgagcgttacgaagtatctaaaacagtggaggatcgagctggccatcctctcattgac
aggcattatgagcgttacgaagtttctaaaaccattgaggagcaacctggccagtcattt
gctgacaggaataagtccaagtcaacttcagaactgaatgaattcaacacaatcagaaat
ggtactcagagcaagtgttcagagaggtcctggaacacgggtgactcgcagaagaagtct
cagaaggagcacaacctttctgcagcagagttggagagacagcaaatccttcaggaaatg
aggaagaaaacatctctacacacggacagcagctggattaggcagcgcagttccagtata
cataaagagcctattaatctgtacagcaatagcatgaggaggggggagtctttggacaat
ctcgattcttcaagaacaagctcttggaggcaccattcatggctgaaccagtctgcctcc
tcttcatctctgtcctctagtcaagatttcagtcgcccagtgtccacttcaaaccgagcc
tacatgtgcactccttcctccagcaaagcacctcctgcggccacctctgcgagagccccc
tccatgtcccaggcagccccccgggctcagtctcccctctctgcttcccagccagggtct
cagacacgcagcaggtcagtcagtgggaagaaaatctgttcatactgtaataacgttctg
ggcaaaggagcagccatgatcattgagtctcttggtctttgttatcatttacagtgcttt
aagtgtgttgcctgtggatgcgaccttgggggatcccgctctggagctgaagttaggatc
cgaaacaacaaactcttctgcaatgactgctatatcagatttaaaagtacaagttcagga
ggaattgatttacttacagatcttaattaa
DBGET
integrated database retrieval system
