Phaethon lepturus (White-tailed tropicbird): 104624563
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Entry
104624563 CDS
T08325
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet04136
Autophagy - other
plet04140
Autophagy - animal
plet04145
Phagocytosis
plet04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
104624563 (ATG16L1)
04140 Autophagy - animal
104624563 (ATG16L1)
04136 Autophagy - other
104624563 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
104624563 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plet04131
]
104624563 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
plet03029
]
104624563 (ATG16L1)
Membrane trafficking [BR:
plet04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
104624563 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
104624563 (ATG16L1)
Mitochondrial biogenesis [BR:
plet03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
104624563 (ATG16L1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
ATG16
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR3_2nd
WD40_Gbeta
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_EIPR1
CFAP251_N
NBCH_WD40
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_ACSF4
eIF2A
Beta-prop_NOL10_N
WD40_RFWD3
Beta-prop_NWD2_C
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Ge1_WD40
Beta-prop_WDR41
Tricorn_2nd
CCDC93_CC
CLIP1
CCDC39
ZapB
INO80F
HEF_HK
BEGAIN_coil
Fez1
DUF8181
HTH_6
CEP135_N
Nucleo_P87
AP5B1_middle
Tricorn_N
PALB2_WD40
DUF6383
V_ATPase_I
FUSC
WHD_CYT4
FKBP15
PUMA_CC
YicC-like_N
DUF2332
YabA
Motif
Other DBs
NCBI-GeneID:
104624563
NCBI-ProteinID:
XP_010290265
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MQSRHEISPGHDGTWNDAQLQELAQLKIKHQEELTELHKKRGELAQSVIDLNNQMQQKDK
EMQMNEAKIAEYLQKISELETECQELRSKLQDLERANQTLKDEYDALQITFNALEEKLRK
TTEDNQELVSRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEPDDDIEV
LADETSDTAEETSPVRAVSRTSSKRLSQPAGGLLDSISNIFGRRSLSSFPAPQDNIEPHP
GASKEVRVPTTAICVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVLGDRCEPKGSL
SGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHTLTGHSGKVLSAKFLLDNAR
IVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRTESIV
KELELLGRITALDLNSERTELLTCSRDDLLKIIDLRVGAVKQTFSAQGFKCGSDWTRVVF
SPDGNYVAAGSADGALYIWNVLTGKLERTLAKHHSSSINAVAWSPAGAHVVSVDKGNKAV
LWSEF
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcagacatgagatcagtccaggacatgatggcacatggaatgatgctcagttg
caggaactggcacagctgaagataaagcatcaagaggagctgacagagctgcataagaaa
cgtggcgagttggcacagtctgtaattgatctgaataaccaaatgcagcagaaggacaaa
gagatgcagatgaatgaagcaaaaattgcagagtatttgcaaaagatctctgaactggag
acagagtgccaggaattgcgtagcaaactgcaagaccttgagcgagctaatcagacactg
aaagatgaatatgatgctctccagatcaccttcaatgccttggaggagaaactgaggaaa
actactgaagacaaccaggagctggtctcacgttggatggcagagaaagcacaagaagcc
aatcgtttgaatgcagaaaatgaaaaggattcaaggagacgacaagccaggctgcagaag
gagctagcagaagctgccaaagaacccctgcctgttgaaccggatgatgatattgaagtg
cttgcagatgaaacctctgacacagctgaggagacatctccagtgcgagctgtcagccga
acatccagtaagcgactctcccagccagctggaggccttctggactctatcagtaatatc
tttgggaggcgttctttgtcctcattccctgctccccaggataatatagagccacatcca
ggtgccagtaaagaagtgagagtgcccactactgccatatgtgtctttgatgcacacgat
ggggaggtgaatgcagtgcagttcagccctggctcccggttactagcaacaggaggcatg
gaccggagggttaagctttgggaagtcttgggagataggtgtgagcccaaaggttccctc
tctggtagtaatgctgggattacaagcatagaatttgatagtgctggttcttacctctta
gcagcttcaaatgactttgccagtagaatctggacagttgatgacaatcgattacggcac
accctgacaggtcacagtggtaaagttctgtcagccaagttcttgctggacaatgcacgc
attgtttcgggaagtcatgaccggaccctcaagctctgggacctccgcagcaaagtttgt
ataaaaacagtgtttgcaggatctagctgcaatgacatcgtatgtactgagcaatgtgtc
atgagtggacactttgataagaaaattcgtttctgggacatcaggactgaaagcatagta
aaagaactggagctgcttggaagaatcacagctctcgacctgaactcagagcgaacagag
cttttgacctgttcccgtgatgatctactaaagatcattgatctgcgggttggtgctgtc
aagcagacattcagtgcccagggattcaaatgtggctctgactggacgagagttgtgttc
agccctgacggtaactatgtggctgctggttcagctgatggggccctctacatttggaat
gtgctcactgggaaattggagaggacacttgcaaagcatcatagttcttctatcaatgca
gttgcgtggtcaccagcaggtgcccacgtggtgagtgtggacaaaggaaacaaggctgtc
ctgtggtctgagttttga
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